Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0116 ATGGGGGAGGAGGAAGTGCCCATTTTGAAAACAGAACATTGGCATGAACTTAAGACGCCAGTAGCTGCTAAGAAGAAGGATGTTTCTATTCCCAATTCCCCAGGGTCAGAAGCAAAACGTTGCAGTTCTGGCTGTGCTTTTTCCAGATTGGAACACAGTAAAGTGGAGTCATTAAAACGTTCTAAATCAGCTATGAAGCTTGGTGGATTGATATTATTTTATACCATAGCTATGGCAGTAGAGACTATTGGTGGTTTGAGAGCTAACAGTCTAGCTGTAATGACAGATGCAGCCCACTTGCTTAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCAGTTTGCGTTTCGGGCTGGGAGGCAACACTGCAACACTCATTCGGGTATTACCGTCTTGAAGTTTTAGGTGCCCTTGTGTCTGTTCAGCTCATATGGCTGATTTCTGGGGTCTTAATCTACGAGGCGATCGACCGGATTCTTAGCCAAAAGACTAAGGTGGATGGTTTCCTTATGTTTGCCATTGCAGCTTTTGGATTCACTCTTAACTTGTTTATGGTCATGTGGCTTGGCCATAGCCACCACTCTCATTCATCTCATTGTTGTCATCATCATCATGATCATCACTCTCACTCTCATCAGAATGACTTGGATCATGAACCTGACCATAAGGAGGAGGAGATTTTCACAGCAACCAAACAAGAGGGTGCTTCTTTGGGGTCAAAGGACAATAGTTCAATGTTGAACATAAATCTCCAAGGTGCTTATCTTCATGTCATTACTGATATGATTCAATCTATTGGTGTGATGATTTCTGGAGTCATTCTATGGTTTAAACCCGACTGGATCGTCGTCGATTTAATCTGCACTCTTGTATTTTCTGTTCTTGCTTTAGCTACTACTTTCTCTATGCTTAGACGTATAGCTGGTATATTGATGGAAGGAACACCTAGGGAGATCAATATTGAGAGCCTGGAAAATGAGCTCAAGGACATAAAAGGAGTCCATTATTTGCATGACTTGCACATTTGGTCCATAACGGCCGGAAAAGTCGTGTTGTCGTGCCATGTTGTCGCCGAAGCCGGAGTTTGTTCTAGGGAGCTAATTTTGAAGATTAGAAGCCTTTGTGAAGACAGATACAATATAATCCATACTACCATACAAGTTGAGTAG 1170 42.48 MGEEEVPILKTEHWHELKTPVAAKKKDVSIPNSPGSEAKRCSSGCAFSRLEHSKVESLKRSKSAMKLGGLILFYTIAMAVETIGGLRANSLAVMTDAAHLLSDVAGFSVSLFAVCVSGWEATLQHSFGYYRLEVLGALVSVQLIWLISGVLIYEAIDRILSQKTKVDGFLMFAIAAFGFTLNLFMVMWLGHSHHSHSSHCCHHHHDHHSHSHQNDLDHEPDHKEEEIFTATKQEGASLGSKDNSSMLNINLQGAYLHVITDMIQSIGVMISGVILWFKPDWIVVDLICTLVFSVLALATTFSMLRRIAGILMEGTPREINIESLENELKDIKGVHYLHDLHIWSITAGKVVLSCHVVAEAGVCSRELILKIRSLCEDRYNIIHTTIQVE 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2089928 2091097 - CaPI482276_03g001160.1 Cam03g0116 122382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0116 389 NCBIfam cation diffusion facilitator family transporter 71 389 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam03g0116 389 SUPERFAMILY Cation efflux protein transmembrane domain-like 68 313 IPR027469 -
Cam03g0116 389 Gene3D Cation efflux protein transmembrane domain 67 311 IPR027469 -
Cam03g0116 389 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 25 389 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Cam03g0116 389 Pfam Cation efflux family 71 312 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam03g0116 389 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 318 389 IPR036837 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0116 Cam-Chr3:2089928 Cam06g0138 Cam-Chr6:3304388 3.20E-67 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0116 K14689 - csv:116403740 608.986