Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0134 ATGGCGAAGCCAAGCGAAGGGCTTCCTAGAACCATCGTTGCCGTCAGAAATGGCCCGACACTAGGCCTTCTGACTCTTAAATACCCTAAAATATTCCCAATCCGTGTTCATATTTCCAAATTTCCACCGATTCTCTTCACATTTCCTTCAAATCTTTTCTGGGTCTTTCGTTTCTCATCCCAATCATCAAACCCTTTCAATTTTATGGATAATCTCCTTGAAGATTTTCCCAATTCCTGGAATAATTATCACTTCTATCCCCATCTCTCTAATGGCTTGTTCAAAGTCAATCGCGAATCCGTTGATCCCCTTCAAATTCCGGCCAAATCCCAGCAGCATCAACACCAACTCAGTAATAATTCCTCTTCTTCGCCGTCGTCGTCGAGCTCCGAAGGTGACTCGCCTGACAGCCATGACACTTCCAATACGATGCTCAAATACATCACCGAGATGCTGATGGATGAAGGAGAAGATCTCAAAACACAGCCCTGTATGCTTCTTGACTGTTTGGCTCTTCAAGCTGCTGAGAAATCTTTTTATGATGTTCTTGGCCAGAAGTATCCCCCTTCTCCAATCGGAAATGGCGATTCTTCTCAGGATTTCAGCTGTGATAGGGCTGTGAGTAATAACGGTGAAGATGAATCGGAATCTTTATATGGTAACTCCTCTGTTTTTGCCCCTTTTCAAAACTCTCTTTTGAATCAAGATTCGTTTCTTGGGATGCAATTTATTGGGCATTTTAGGCAAGGAGCTGAAGAGGCTAGCAAGTTTCTTCCTGTTAATGGAAGATTTGGAACCATTGACTTGGATAATGATTCTTCTACCTCTCTTCCCTCTAGGGCTGTTGATTTTTCTTGGGTTGGTGCTGAAAATGATGGTAGATCCAGCCTTGAAAATGGGTTATTAAGAGAGAAGAAAAACCGTCTTAGGGACGATAGTGATGAGGAGTTGAGAAGTAGTAAACAATCTGCTAACTTTGCCGATGATAATTCACTGTCTGATTTGTTTGATGAGGTTCTTCTTTGTCGGGGTGAGAGTCGGCAGTCCCCATCGTGTGGTTCCGATGAATCGTCGGAGAGCGAAGCGAATAAGAAGTCGAGAGGGAGAGGGAAAAGGAAAGGGAAGAAGACCACTCGTTCTAGGAAGCAAGAGAATAGTGTGGGAGTTGTGGATTTGTGGACATTGTTGACTCAATGTGCTCAGGCTGTTTCAAATTATGATCAAAGGACTGCAAATGAGTTGCTAAATCAGATTAGGCAGCATTCTAATCCATCTGGGGATGGAAATCAGAGATTAGCTCATTACTTTGCCAAGGGTCTCGAGACTCGGCTCGCTGCCGGGACGCCTCTGTATTTGCCCTTTGCAAGTAATGAAACCTCTGCTGCTGAGATCTTGAAAGCTTATCAGATGTTCATCAAGGCTTGCCCGTTTCGGCGGATGTCGTATTTCTATGCCAATAGAACGATTCTGAAGCTAGCTGAGAAAGTAACAACTTTGCATATTGTTGATTTTGGTATTCTGTATGGTCTCCAATGGCCTTGCTTGATTCAACGGCTCTCGCGTAGACCTGGTGGACCTCCCAAACTTCGGATCACGGGGATTGAGCTTCCCCAGCCGGGATTCCGACCTGCTGAACGTGTTGAGCAGACTGGCCGTCGCCTTGCACATTACTGCAAGAGATTCAATGTGCCATTTGAACACAAGGTCTTGGCACAGAAATGGGAAACGGTTCGATATGAGGATCTCAATCTTGATAGAGATGAACTGACTATTGTGACTTGTATGTTCCGAATGAAGAACGTACCCGACGAAACGGTGGTCGCAAACAGCCCAAGAGACAGGGTTCTAAAGTTAATCAGGAAAATCAACCCAGATCTCTTCATTCATGAAGTCACCAATGGCTCATTCAATACTCCATTCTTCAACACAAGGTTTAAGGAAGCACTCTTTTACTACTCATCGTTATTCGACATGTATGAGGCAACTGTACCTCGAGACAATCCGCAGAGGCATCTTTGTGAGAAGGAAATCCTAGGAAGAGACATCATGAATGTCATAGCGTGCGAGGGGCTCGAGAGAGTCGAAAGGCCAGAGACTTACAAGCAATGGCAAGTAAGGAACACGAGGGCTGGGTTCAAACAAGTACCATTAGACCAAGATCTGCTGAAGAGTGTGGAGAAGATAGTGAACACAGAATACCATCAGGACTTCGTGATCGATCAGGATGGGTCGTGGATGTTGCAAGGGTGGAAGGGACGGATCATCGACGCGTTATCGTGTTGGGTAGTTGCCTAA 2295 45.01 MAKPSEGLPRTIVAVRNGPTLGLLTLKYPKIFPIRVHISKFPPILFTFPSNLFWVFRFSSQSSNPFNFMDNLLEDFPNSWNNYHFYPHLSNGLFKVNRESVDPLQIPAKSQQHQHQLSNNSSSSPSSSSSEGDSPDSHDTSNTMLKYITEMLMDEGEDLKTQPCMLLDCLALQAAEKSFYDVLGQKYPPSPIGNGDSSQDFSCDRAVSNNGEDESESLYGNSSVFAPFQNSLLNQDSFLGMQFIGHFRQGAEEASKFLPVNGRFGTIDLDNDSSTSLPSRAVDFSWVGAENDGRSSLENGLLREKKNRLRDDSDEELRSSKQSANFADDNSLSDLFDEVLLCRGESRQSPSCGSDESSESEANKKSRGRGKRKGKKTTRSRKQENSVGVVDLWTLLTQCAQAVSNYDQRTANELLNQIRQHSNPSGDGNQRLAHYFAKGLETRLAAGTPLYLPFASNETSAAEILKAYQMFIKACPFRRMSYFYANRTILKLAEKVTTLHIVDFGILYGLQWPCLIQRLSRRPGGPPKLRITGIELPQPGFRPAERVEQTGRRLAHYCKRFNVPFEHKVLAQKWETVRYEDLNLDRDELTIVTCMFRMKNVPDETVVANSPRDRVLKLIRKINPDLFIHEVTNGSFNTPFFNTRFKEALFYYSSLFDMYEATVPRDNPQRHLCEKEILGRDIMNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQDLLKSVEKIVNTEYHQDFVIDQDGSWMLQGWKGRIIDALSCWVVA 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2246993 2249287 - CaPI482276_03g001340.1 Cam03g0134 122400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0134 764 MobiDBLite consensus disorder prediction 107 141 - -
Cam03g0134 764 MobiDBLite consensus disorder prediction 190 216 - -
Cam03g0134 764 ProSiteProfiles GRAS family profile. 383 762 IPR005202 -
Cam03g0134 764 MobiDBLite consensus disorder prediction 191 216 - -
Cam03g0134 764 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 366 761 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cam03g0134 764 MobiDBLite consensus disorder prediction 346 383 - -
Cam03g0134 764 Pfam GRAS domain family 394 761 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0134 Cam-Chr3:2246993 Cam10g0430 Cam-Chr10:6656386 1.70E-56 dispersed
Cam01g1789 Cam-Chr1:31454873 Cam03g0134 Cam-Chr3:2246993 1.40E-32 transposed
Cam02g0171 Cam-Chr2:2706176 Cam03g0134 Cam-Chr3:2246993 2.70E-30 transposed
Cam05g2278 Cam-Chr5:30894575 Cam03g0134 Cam-Chr3:2246993 9.80E-39 transposed
Cam09g0093 Cam-Chr9:1760425 Cam03g0134 Cam-Chr3:2246993 4.70E-16 transposed
Cam09g0961 Cam-Chr9:9939946 Cam03g0134 Cam-Chr3:2246993 2.20E-56 transposed
Cam10g2080 Cam-Chr10:34543467 Cam03g0134 Cam-Chr3:2246993 4.20E-155 wgd
Cam02g2074 Cam-Chr2:33644658 Cam03g0134 Cam-Chr3:2246993 1.00E-149 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51617 PF03514 GRAS 5.30E-115 CL0063 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0134 K27753 - csv:101217374 1227.62