Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0216 ATGGGTTGCTTTCGTTGTACCGGTTCATCCAGCAAGAAATCGGAGAACATCGAAGAAAACAACCCCCATACCTTCAATTCCAAAACCCACAAGCCCGTTGATCGAACGCCTTCAGATAAAGCCAAAGTAAATTCAAGTTTGGCAGTGAAGAGGGATTCTGATGTGAAGGTGGTTGTGACAAAAGATGACCAATTGGCTTTAGATGTAAAGAAATTGAATTTAAAAGATGAGGTTTCTGAGGAAGGAGAATCCAATGGCCGTGCCAAGACTTTTACGTTTGAAGAACTCGCTGCTGCGACAGGCAATTTCAGGTCAGATTGCTTCTTGGGCGAAGGAGGATTTGGCAAAGTTTACAAGGGGTACTTGCAGAAAGTTCATGAGGTTGTAGCAATCAAACAACTTGACCGCAATGGACTTCAAGGAATTCGAGAGTTTGTTGTCGAAGTCTTGACTTTAAGTCTAGCTGATCATCCTAACCTTGTAAAACTTATTGGCTTTTGTGCTGAGGGGGATCAGAGGTTGTTGGTTTATGAATATATGCCATTGGGATCATTGGAAAACCATTTACACGATCTTCGACCCGGTGCAAAAGTAATTGATTGGAACACAAGAATGAAAATAGCAGCAGGTGCAGCGAGGGGGTTGGAGTATTTGCATGAGAAGATGAAGCCTCCAGTTATATATCGTGATCTGAAATGTTCAAACATTTTGCTCGGTGAAGGATATCATCCGAAGCTATCTGATTTCGGATTGGCTAAAGTAGGTCCTAGTGGGGATAAAACCCACGTTTCAACCAGGGTTATGGGCACATATGGGTATTGTGCTCCAGATTATGCAATGACGGGCCAACTGACATTCAAATCAGATATTTACAGCTTTGGCGTTGTTTTATTGGAACTCATCACGGGCAGGAAAGCAATCGATCATTCAAAACCTCATTCAGAGCAAAATCTTGTGGCTTGGGCGCGACCTTTGTTCCGAGACCGGAAGAAGTTCTCACAAATGGTTGATCCATTGCTCCAAGGACAATATCCAGTGAGAGGATTATACCAATCTCTAGCCATAGCCGCAATGTGTGTTCAGGAGCAACCGAATATGCGGCCAGTTATATCTGATGTGGTAACCGCCTTAAACTACCTTGCTTCCCAGAAATATGATCCCCAATCTCAACCAAACCATAGCTCCCAAAAGAGACCATCTTCTCTTAAAATGGAACGGGACGATGATAAGAGGGAAACTTCAGACAACGAGGGGTCAGAGAGAGAGTGA 1269 43.58 MGCFRCTGSSSKKSENIEENNPHTFNSKTHKPVDRTPSDKAKVNSSLAVKRDSDVKVVVTKDDQLALDVKKLNLKDEVSEEGESNGRAKTFTFEELAAATGNFRSDCFLGEGGFGKVYKGYLQKVHEVVAIKQLDRNGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPLGSLENHLHDLRPGAKVIDWNTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHSKPHSEQNLVAWARPLFRDRKKFSQMVDPLLQGQYPVRGLYQSLAIAAMCVQEQPNMRPVISDVVTALNYLASQKYDPQSQPNHSSQKRPSSLKMERDDDKRETSDNEGSERE 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3148710 3151514 + CaPI482276_03g002160.1 Cam03g0216 122482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0216 422 MobiDBLite consensus disorder prediction 383 398 - -
Cam03g0216 422 MobiDBLite consensus disorder prediction 1 44 - -
Cam03g0216 422 MobiDBLite consensus disorder prediction 399 422 - -
Cam03g0216 422 SMART serkin_6 103 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0216 422 Gene3D Transferase(Phosphotransferase) domain 1 180 405 - -
Cam03g0216 422 CDD STKc_IRAK 109 378 - -
Cam03g0216 422 Gene3D Phosphorylase Kinase; domain 1 71 179 - -
Cam03g0216 422 FunFam probable serine/threonine-protein kinase RLCKVII 75 179 - -
Cam03g0216 422 SUPERFAMILY Protein kinase-like (PK-like) 89 399 IPR011009 -
Cam03g0216 422 MobiDBLite consensus disorder prediction 383 422 - -
Cam03g0216 422 PANTHER OS07G0668900 PROTEIN 52 405 - -
Cam03g0216 422 MobiDBLite consensus disorder prediction 16 38 - -
Cam03g0216 422 Pfam Protein kinase domain 108 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0216 422 ProSiteProfiles Protein kinase domain profile. 103 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0216 422 FunFam Serine/threonine-protein kinase PBS1 180 396 - -
Cam03g0216 422 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524(InterPro)
Cam03g0216 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0216 Cam-Chr3:3148710 Cam10g2032 Cam-Chr10:34163794 4.60E-144 dispersed
Cam02g2142 Cam-Chr2:34187682 Cam03g0216 Cam-Chr3:3148710 1.70E-150 wgd
Cam02g2197 Cam-Chr2:34720442 Cam03g0216 Cam-Chr3:3148710 1.40E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85024 PF00069 Pkinase 9.80E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0216 - - - 0.0