Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0232 ATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGGTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTCATCGGACATTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTCGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGGCCGGAGGAGCCGACAAGTGTGCTGCCAAGGGTCAAGTGTCATTTATTTCAGCAGAAGGAATTCATCAACTTCATATCTTCATATTTGTGTTGGCTGTTTTCCATGTTTTGTACTGTGTTCTTACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACATGGGAAAAAGAGACCAAAACTGCAGAATACCAATTCTCACATGATCCGGAGAGATTTAGGTTTGCAAGAGACACCTCGTTTGGGAGAAGACATTTGAGCTTCTGGACAAAGAATCCTGCCCTAATGTGGATAGTTTGTTTCTTCAGGCAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTAAGACATGGGTTTATAATGGCACATTTAGCACCTCAAAGTCATACACAATTTGATTTTCAAAAATACATTAATCGATCTCTTGAAGAGGACTTCAAAGTTGTTGTGGGAATCAGCCCACCAATTTGGTTCTTCGCTGTGCTGTTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCGTTCATCCCACTAATCATTTTGCTGCTGATCGGGACAAAGTTGCAAGTGATCATAACGAAAATGGCACTAAGAATACAAGAAAGAGGAGAAGTAGTGAAGGGGGTGCCAGTGGTTGAGCCTGGCGATGACCTTTTTTGGTTCAATCGCCCTCGCCTTATTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTCCAAGTTGCCTTCTTTGCTTGGACTTGGTATGAGTTCGGGTTGAATTCTTGTTTCCATGAGCATACAGAGGATGTGGTGATCCGAATTTCAATGGGGGTGATTGTACAAATCCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTGGTCACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCGGCCCTTCGCAATTGGTACCACTCGGCTCGGAAGCACATCAAACACAACCGCGGTTCGATCACTCCAATGTCGAGCCGACCTGCCACCCCGACTCACAGCATGTCACCGGTCCACCTTCTCCGTCACTACAAGAGTGAGGTCGATAGCTTCCACAACTCGCCCAGAAGGTCACCATTTGACACTGATCGTTGGGACAACGATTCGCCCTCACCGTCCCGTCATGCTGATGGTTCGTCTTCATCACAACCCCACATCGAGATGGGAGGCTATGACAAAGATCCGACCGAACCGGGGTCGACTCAAATTGACCCGGTTCAATCATCCCAAACCCGGACTCAACATGAGATTCAAATTGGCGGCCCCAAAGACTTTTCCTTTAACAGAGCAGAGTGA 1749 46.2 MAAAAGGKSLEQTPTWAVAVVCFVLLLISIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEKESEMNKMGDQSVQHLSTNGRRLLHLAGNGGSFRRILAAAGGADKCAAKGQVSFISAEGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHTEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHSARKHIKHNRGSITPMSSRPATPTHSMSPVHLLRHYKSEVDSFHNSPRRSPFDTDRWDNDSPSPSRHADGSSSSQPHIEMGGYDKDPTEPGSTQIDPVQSSQTRTQHEIQIGGPKDFSFNRAE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3372246 3381189 - CaPI482276_03g002320.1 Cam03g0232 122498

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0232 582 MobiDBLite consensus disorder prediction 551 568 - -
Cam03g0232 582 MobiDBLite consensus disorder prediction 499 582 - -
Cam03g0232 582 MobiDBLite consensus disorder prediction 523 537 - -
Cam03g0232 582 Pfam Mlo family 8 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cam03g0232 582 MobiDBLite consensus disorder prediction 499 522 - -
Cam03g0232 582 PANTHER MLO-LIKE PROTEIN 1 3 528 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0232 K08472 - - csv:101217225 1096.26
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1063 Cam-Chr2:17430523 Cam03g0232 Cam-Chr3:3372246 6.10E-117 dispersed
Cam03g0232 Cam-Chr3:3372246 Cam08g1381 Cam-Chr8:20095875 8.50E-133 dispersed
Cam03g0232 Cam-Chr3:3372246 Cam03g0234 Cam-Chr3:3420926 1.50E-108 proximal
Cam05g2289 Cam-Chr5:30995493 Cam03g0232 Cam-Chr3:3372246 1.70E-189 transposed
Cam02g2174 Cam-Chr2:34506213 Cam03g0232 Cam-Chr3:3372246 6.90E-255 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cam09g1923 . 3 553 MLO family AT5G53760 69.7 1.0e-218 756.5
Cam11g1837 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cam05g1118 . 7 466 MLO family AT5G53760 51.1 2.6e-126 449.5
Cam09g1923 . 3 553 MLO family AT1G26700 68.0 6.7e-212 733.8
Cam11g1837 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cam03g0232 . 8 536 MLO family AT2G39200 63.8 1.2e-192 669.8
Cam05g2289 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cam02g2174 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cam02g2174 . 1 416 MLO family AT1G61560 65.9 5.8e-160 560.8
Cam03g0232 . 1 416 MLO family AT1G61560 66.3 2.7e-157 552.0
Cam05g2289 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cam01g2152 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cam01g2152 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cam10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cam08g1381 . 4 480 MLO family AT2G17430 58.3 2.9e-151 532.3
Cam01g2152 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cam10g0014 . 5 574 MLO family AT2G17480 59.0 2.6e-177 619.0
Cam08g1381 . 11 465 MLO family AT2G17480 60.6 2.2e-152 536.2
Cam03g0232 . 8 463 MLO family AT2G17480 52.6 2.3e-125 446.4
Cam02g2174 . 8 463 MLO family AT2G17480 50.3 2.5e-124 443.0
Cam08g1381 . 1 381 MLO family AT1G42560 59.7 4.1e-128 454.9
Cam01g2152 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cam10g0014 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cam06g0173 . 6 419 MLO family AT4G24250 54.2 5.9e-117 417.9
Cam02g0035 . 10 421 MLO family AT4G24250 50.9 5.2e-113 404.8
Cam01g2152 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cam10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cam08g1381 . 7 381 MLO family AT5G65970 58.0 1.1e-120 430.6
Cam02g2174 . 2 381 MLO family AT5G65970 51.8 5.6e-106 381.7
Cam03g0232 . 2 381 MLO family AT5G65970 50.9 2.2e-102 369.8
Cam08g1381 . 2 543 MLO family AT2G33670 59.9 3.9e-174 608.2
Cam01g2152 . 20 470 MLO family AT2G33670 61.6 5.1e-158 554.7
Cam10g0014 . 29 471 MLO family AT2G33670 58.7 9.6e-141 497.3
Cam05g2289 . 64 525 MLO family AT1G11310 64.3 2.2e-169 592.4
Cam03g0232 . 63 506 MLO family AT1G11310 64.9 4.4e-165 578.2
Cam02g2174 . 63 520 MLO family AT1G11310 62.7 6.9e-163 570.9
Cam06g0173 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
Cam06g0173 . 1 508 MLO family AT4G02600 72.9 8.9e-214 740.0
Cam05g1118 . 3 560 MLO family AT1G11000 67.0 4.8e-213 737.6
Cam10g0066 . 1 494 MLO family AT1G11000 51.9 7.9e-131 464.5
Cam06g0173 . 1 508 MLO family AT4G02600 72.9 8.9e-214 740.0
Cam05g2289 . 64 525 MLO family AT1G11310 64.3 2.2e-169 592.4
Cam03g0232 . 63 506 MLO family AT1G11310 64.9 4.4e-165 578.2
Cam02g2174 . 63 520 MLO family AT1G11310 62.7 6.9e-163 570.9
Cam05g1118 . 3 560 MLO family AT1G11000 67.0 4.8e-213 737.6
Cam10g0066 . 1 494 MLO family AT1G11000 51.9 7.9e-131 464.5
Cam08g1381 . 2 543 MLO family AT2G33670 59.9 3.9e-174 608.2
Cam01g2152 . 20 470 MLO family AT2G33670 61.6 5.1e-158 554.7
Cam10g0014 . 29 471 MLO family AT2G33670 58.7 9.6e-141 497.3
Cam02g2174 . 1 416 MLO family AT1G61560 65.9 5.8e-160 560.8
Cam03g0232 . 1 416 MLO family AT1G61560 66.3 2.7e-157 552.0
Cam05g2289 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cam01g2152 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cam01g2152 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cam10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cam08g1381 . 4 480 MLO family AT2G17430 58.3 2.9e-151 532.3
Cam01g2152 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cam10g0014 . 5 574 MLO family AT2G17480 59.0 2.6e-177 619.0
Cam08g1381 . 11 465 MLO family AT2G17480 60.6 2.2e-152 536.2
Cam03g0232 . 8 463 MLO family AT2G17480 52.6 2.3e-125 446.4
Cam02g2174 . 8 463 MLO family AT2G17480 50.3 2.5e-124 443.0
Cam08g1381 . 1 381 MLO family AT1G42560 59.7 4.1e-128 454.9
Cam01g2152 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cam10g0014 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cam01g2152 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cam10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cam08g1381 . 7 381 MLO family AT5G65970 58.0 1.1e-120 430.6
Cam02g2174 . 2 381 MLO family AT5G65970 51.8 5.6e-106 381.7
Cam03g0232 . 2 381 MLO family AT5G65970 50.9 2.2e-102 369.8
Cam09g1923 . 3 553 MLO family AT5G53760 69.7 1.0e-218 756.5
Cam11g1837 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cam05g1118 . 7 466 MLO family AT5G53760 51.1 2.6e-126 449.5
Cam03g0232 . 8 536 MLO family AT2G39200 63.8 1.2e-192 669.8
Cam05g2289 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cam02g2174 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cam06g0173 . 6 419 MLO family AT4G24250 54.2 5.9e-117 417.9
Cam02g0035 . 10 421 MLO family AT4G24250 50.9 5.2e-113 404.8
Cam09g1923 . 3 553 MLO family AT1G26700 68.0 6.7e-212 733.8
Cam11g1837 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cam06g0173 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001805 3 2 2 3 3 2 3 2 2 2 2 2 3 2 2 3 2 2 3 2 2 2 1 2 2 2 2 2 2 4 68