Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0241 ATGGAGAAAAATGAGGCACATACGGTGGCGGTGGGTAGTCCGTGTGCGGCTTGTAAAATTCTCCGGCGAAGATGCCGAGAGAACTGCGAATTGGGGCCGTATTTTCCTCCAACGGAACCTCTCAAATTCACTATTGCTCATAGGGTCTTCGGTGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTAAGTCGCAAAGAGCAGATGCTGTGAACAGTATGGTATATGAGGCAAGTGCAAGAATAAGAGATCCAATTTATGGATGTGCAGGCTCAATTTTCCAACTCCAAAAACAAATAAATGACCTACAAGGAGAGTTAGCCAAGGCTCAAGCAGAGGTTCTCAAAATGCAATGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGGCTCAAATGCCACAACCACCAATGTATGATCATCAACCACTTAATCAAAATTACAACATTTCTAGCCCTCAAAGTTATCAAACCTATTCATACTTATTTGAGGAGGGTAATATTTTGGAGCCTCTTTGGACTTGA 531 42.18 MEKNEAHTVAVGSPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHRVFGASNIIKLLQDLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFQLQKQINDLQGELAKAQAEVLKMQCQQANLMTLICKELAQMPQPPMYDHQPLNQNYNISSPQSYQTYSYLFEEGNILEPLWT 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3530318 3531860 - CaPI482276_03g002410.1 Cam03g0241 122507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0241 176 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Cam03g0241 176 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Cam03g0241 176 Coils Coil 93 120 - -
Cam03g0241 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0241 Cam-Chr3:3530318 Cam09g2080 Cam-Chr9:35352295 1.30E-39 dispersed
Cam03g0241 Cam-Chr3:3530318 Cam03g0244 Cam-Chr3:3559117 7.90E-66 proximal
Cam02g2159 Cam-Chr2:34387261 Cam03g0241 Cam-Chr3:3530318 7.00E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51625 PF03195 LOB 6.20E-39 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0241 - - - 0.0