Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0254 ATGATTGTAGCAGCAGGGTCGAGCTCCAATGGCGGAATTGGGAGCGGAGAATTGGCCAATTTTGTCCGGCAAGTGGTGGTGGGGCGGTGGTTTTCTCTTTTTGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCTAGAGACATCAAAAAGACGCTCCAATGTGATCAAACGACACTAAACAAAATTGGGTTTTACAAAGATTTGGGATCCAACGTCGGCGTTATTGCCGGACTTCTGGCGGAGGTGGCGCCAACTTGGCTGGTTCTTCTCATCGGCGCCGCCTTCAATTTTCTTGGCTACTTTAAGATATGGCAAGCCGTCACCGGAAAAATTGTTCAGCCCACCGTCGCCTTCTTTTGCTTTTACATTATGGTTGGAGCTAACTCTCAGAATTTTGCCAATACAGGAGTGCTTGTCACGTGCGTGAAGAACTTTCCAGAAAGAAGAGGAGTGATGTTGGGCCTTCTAAAGGGCTTTGTGGGCCTAAGCGGAGCTATCATGACCCAACTTTACATTGCGATTTACGGCCACGATACCAAATCTCTTGTTCTTCTAATCGCCTGGTTTCCTTCTATAATCTCTTTGATCTTCGTCTACACAATCAGAGAAATCAAAGCCGTAAAACACCCAAATGAATTTAGAGTTTTCGTTCAATTCCTTTGCGTCACAGTCCTTTTAGCCATCTTCCTCACCGTCTTAGTCTTCGTTCAAAAACGAGTCCGATTCCATCAATCAGCTCACATCGCCATTGTCTCTGCCATTCTTGCTCTGCTTTTTGTTCCGTTGTTAATCGCCATTAGAGAAGAACTCCTTCTCTGGAACCTCAATAAACGAACTATTCCTACAAACCCTTTCACCAGAATTAGAATCGAAAACAACCCCCAGACAACAACAACCCCAATTCCTTCTTCAAATCAAACTCAATTCAGTTCTTGTTTCGCTAACATTTTCAACAAACCCGAAAGAGGCGAAGATTACACAGTTCTTCAAGCGATTTTCAGTATCGATATGCTTATTTTATGTTCCACTATGTTAATCGGCGTCGGTGCAAGCTTAACCGCCATTGACAATCTAGGGCAAATCGGTGAATCCCAAGGCTACCCATCTGAAACAATCAACTCATTCATCTCTTTAGTAAGTATTTTCAACTTCACTGGTAGAATCTTTTCTGGGTTCGTCTCGGAAATCTTGCTTGAGAAATTCAAATTCCCTAGGCCATTGATGCTCACACTCATCCTCTTGATTTCCTGTATTGGGCATCTTTTGGTAGCCTTTCCCTTTGAGGATTCGCTCTACGTTGCTTCAATCATAATTGGATTTTCAATGGGGTCTCAAGTTCCATTGCATTTCGCGATGATTTCAGAGATTTTTGGGCTGAAACATTACTCGACTTTGTTTAATTTTGGGCAATTGTCTTGTCCAATTGGGTCTTATATTCTGAATGTAATGGTGACTGGGAAGATGTATGATAAGGTAGCGCAATTGGGGAGTAATCCAAACAAGTTTCATTGTGCAGGAAGTCATTGTTATGAACAATCGTTTTTGATTTTGGGTGGATTAACGTTTATTGTAGCGATGATATCGTTGGTTTTGGTGATGAGGACGAGGGATTTTTATAGAGGGGATATATACAAGAAATTCAGGGAAGATATGGAATCTTTGAAGACGGAAGTCGAGTTTTACAAAGTGGATGAGAAGAGGACTAGGATTGGGAATTTACTTGTTGATAAACATACCATCAATTTCAAGAGCGAACCATTTTCAAATTGTACTCATCCGGAAACTTCTCTATGTCCCCTGCTTGCTTCCATTTTGGCGCTGTTCTTTCAAAATTCGGTAGCAGTAACTGAAAATCCGAAGAGAGAGAACAATTGCTTGAAATCCATGGAAATGGATGGTCCTCTAGACTTCGAGTCGGAAGACCCGCTTCTCAGTTCCCCAGTCACTCTCAAGAAAAGGAAAAAGATTATAGGGTTAGATGATCTTCTGACTGATCACTACAAGGATAAATGTAAACTGGTTGAGAAAGAATCTAAACAGGCAAAGAAGAAAAAGAACTATGATTCAGATGATGATGATTTTGGCAAAGAGGCTGTGGTGTCCCAAGTCGTTGATGAATGCCAAAATAAGATGAATCAATTGGGAGGTGAGGAAGATACATCCATATGGGGGTTAAACGTTTTTGGAGAACAGAGACCCCCACCAGCTTTACAAAGTCACGAACTCGAAAGTTGCCACTTTTTGCAAACATTCCTAAATAATGAAGTTAATTCTTTGGTGAATCTCACTGTGGAGAAAGGTGATGCTTTCCTTGAAGGTTTATTGGTAAATGGTTGGCTGTCAACACTTGTTTCTTTGACAGGTCGTGCGGAAAAGTCACTTGCCATATGGACTTTCAATTTAATGTTATATTCATCAAGAGAAGATCTAAGAACATCAGCTTGTGATTTCTGGAGGGATGTCATGTTAACAACAAATGAGGTTGAGCAGCAGCATCTCCAAATCGATTGGTTTCCTAACTATGCTCAGTTAGGAGAAGCTCTTGAGAGTTACGGGTATAGATTTGAATGCTCATTAAACCCTGGATTCGTCCACACTGGTTCTGGACGTGGAGGGCCACCTCAGAATATAAGGGCTTGGATCAAATTTATTACTATTTGTTGTCAAACAAAGATTAAAAATAATATATTTACGTCCTCTGAAGTTGAGCGGCTAGCTGAAGCCATTATTTGTTTATTTCTTGACCGCCAGTTTCAAGGCATAACCATGCTCTTATGTGAATGCCTGCAATCGCTAATCAATTACTTCACAGATGAAGAATGGAAGGCATGTTGTGAAAACATAGCAAAATCTCTTGTCTGCAGAATTCCTATGGATCTAAACTGTTTGCGAGCTGTGGAATGCATTTCTGGAGTTGATCCGCGTAGTAAATATCTGAGGAGTACAATTGCCTATCAAATTCTTCTTATTTGCTTTGAAAATGAGGCTACCAATGAAGAAGAGGTTTTGAGAGTACTTACTTCCATTACCGTGAAAGACAAAAGTTGTGACCTATTTAAGCTGTACATTTACTTGGTGTTGACGGAGAACTGGCTCGTCAGTAGTCGAATGTTAGAAGGCAAACCACTAATCTGTGAAATGTGGGGTCTGTTTCTCAGAAACTGCTCCTGCCAAATCGCCAGTACCGATTTGAGGTCGTATGCATCAAAGGTTCGTAACAAAGCTTCATATATCTTGCAAAGCTCCTTTGACGAGTAG 3282 41.32 MIVAAGSSSNGGIGSGELANFVRQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKKTLQCDQTTLNKIGFYKDLGSNVGVIAGLLAEVAPTWLVLLIGAAFNFLGYFKIWQAVTGKIVQPTVAFFCFYIMVGANSQNFANTGVLVTCVKNFPERRGVMLGLLKGFVGLSGAIMTQLYIAIYGHDTKSLVLLIAWFPSIISLIFVYTIREIKAVKHPNEFRVFVQFLCVTVLLAIFLTVLVFVQKRVRFHQSAHIAIVSAILALLFVPLLIAIREELLLWNLNKRTIPTNPFTRIRIENNPQTTTTPIPSSNQTQFSSCFANIFNKPERGEDYTVLQAIFSIDMLILCSTMLIGVGASLTAIDNLGQIGESQGYPSETINSFISLVSIFNFTGRIFSGFVSEILLEKFKFPRPLMLTLILLISCIGHLLVAFPFEDSLYVASIIIGFSMGSQVPLHFAMISEIFGLKHYSTLFNFGQLSCPIGSYILNVMVTGKMYDKVAQLGSNPNKFHCAGSHCYEQSFLILGGLTFIVAMISLVLVMRTRDFYRGDIYKKFREDMESLKTEVEFYKVDEKRTRIGNLLVDKHTINFKSEPFSNCTHPETSLCPLLASILALFFQNSVAVTENPKRENNCLKSMEMDGPLDFESEDPLLSSPVTLKKRKKIIGLDDLLTDHYKDKCKLVEKESKQAKKKKNYDSDDDDFGKEAVVSQVVDECQNKMNQLGGEEDTSIWGLNVFGEQRPPPALQSHELESCHFLQTFLNNEVNSLVNLTVEKGDAFLEGLLVNGWLSTLVSLTGRAEKSLAIWTFNLMLYSSREDLRTSACDFWRDVMLTTNEVEQQHLQIDWFPNYAQLGEALESYGYRFECSLNPGFVHTGSGRGGPPQNIRAWIKFITICCQTKIKNNIFTSSEVERLAEAIICLFLDRQFQGITMLLCECLQSLINYFTDEEWKACCENIAKSLVCRIPMDLNCLRAVECISGVDPRSKYLRSTIAYQILLICFENEATNEEEVLRVLTSITVKDKSCDLFKLYIYLVLTENWLVSSRMLEGKPLICEMWGLFLRNCSCQIASTDLRSYASKVRNKASYILQSSFDE 1093
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3651954 3663274 - CaPI482276_03g002540.1 Cam03g0254 122520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0254 1093 Pfam Nodulin-like 29 274 IPR010658 -
Cam03g0254 1093 CDD MFS_Mch1p_like 28 533 - -
Cam03g0254 1093 Gene3D MFS general substrate transporter like domains 336 546 IPR036259 -
Cam03g0254 1093 PANTHER ACTIN PROTEIN 2/3 COMPLEX SUBUNIT-LIKE PROTEIN 637 1092 - -
Cam03g0254 1093 Coils Coil 552 572 - -
Cam03g0254 1093 SUPERFAMILY MFS general substrate transporter 33 548 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0254 Cam-Chr3:3651954 Cam03g0266 Cam-Chr3:3726154 1.80E-176 dispersed
Cam03g0254 Cam-Chr3:3651954 Cam03g0256 Cam-Chr3:3671198 1.70E-113 proximal
Cam03g0254 Cam-Chr3:3651954 Cam03g0257 Cam-Chr3:3675591 1.70E-57 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0254 - - - 0.0