Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0257 ATGGATAATCTTGGCCAAATCGGTGAATCTCAAGGCTACTCAACTGAATCCATCGATTCCATCATCTCAATCGTTAGCATTTTCAACTTCTCCGGTAGAATCTTTTCTGGGTTTGCTTCAGAAATCTTGCTAGAGAAACTCAAATTCCCTAGACCATTGATGCTCACTTTCACTCTTTTGATCTCTTGTATTGGACATATCTTAGTAGCTTTTCCCTTCCATCAATCTCTTTACATTGCATCAATCATAATGGGGTTTTGTTTGGGTTCTCAAATTCCATTGTATTTCGCTATGATTTTAGAGATTTTCGGTCTCAAACATTACTCCATGTTGTACAATTTCGGCCAACTCACTTGCCCTGTTGGGACTTATGTTCTCAATGTATTGGTGGCCGGAAAATCCTACGACGAGGAAGCCAAGTCGAAAGAACAGAACCAAACTTCGCTTGAAACAGAGCATCCGCGAATGATGAAAGCAGGGGTTCTTTCTCAAGGGTACAATTGTAAATATCTCCACACATTTAGGACATGTATGGAAGAGAGTTAG 546 40.11 MDNLGQIGESQGYSTESIDSIISIVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMGFCLGSQIPLYFAMILEIFGLKHYSMLYNFGQLTCPVGTYVLNVLVAGKSYDEEAKSKEQNQTSLETEHPRMMKAGVLSQGYNCKYLHTFRTCMEES 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3675591 3676448 + CaPI482276_03g002570.1 Cam03g0257 122523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0257 181 Gene3D MFS general substrate transporter like domains 3 138 IPR036259 -
Cam03g0257 181 SUPERFAMILY MFS general substrate transporter 6 129 IPR036259 -
Cam03g0257 181 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 174 - GO:0016020(PANTHER)
Cam03g0257 181 Pfam Major Facilitator Superfamily 7 126 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0257 Cam-Chr3:3675591 Cam03g0266 Cam-Chr3:3726154 8.70E-44 dispersed
Cam03g0254 Cam-Chr3:3651954 Cam03g0257 Cam-Chr3:3675591 1.70E-57 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0257 - - - 0.0