Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0282 ATGGAGAAATCTGGATATGGTCGCGATGGAATTTTCAGGTCTTTACGGCCTCCGCTCGTCTTTCCTAAAGATCCCAATCTCTCGATGATCTCTTTCCTCTTCCGAAATTCGTGTTCTTATCCAAATAGACTAGCCATTGTGGATGCGGAATCTTCTGATTCTGTGTCGTATTCACAACTTAAAGCCTCTGCAATTAGGGTCTCCAATGGGTTGATCCAATTGGGTATCGAGAAAAACGACGTGGTGTTGATTTTTGCTCCAAATTCAGTTCAATTTTCCGTTTGTTTCATTGGGATTATTGCTATTGGGGCTATTGTAACCACTTGTAATCCTGTCTACACGGTGTCTGAGCTAACCAAGCAAGTTAAAGATGCTAAACCCAAACTTGTGATATCTGTTGCTGAGTTGTGGGACAAAGTGAAGGATCTAAACATCCCAACTGTGTTACTGGACCAGCAGATTCCTTCAGCAATTCACTCTTCCAAAATATTATGTTTCAATGATTTGATGAACATGGCTGGTGATAAATCTGGGTCTGAGTTCCCAATTGTTGGGGTGAAACAGAGTGACACAGCTGCACTTCTGTATTCATCAGGAACAACAGGAGCTAGTAAGGGTGTGATTCTGACTCATAGAAACTTCATAACGTCTTCATTGATGATTACAATGGATCAGACGTTTAGGGGAGAGGAACATGGCGTATATCTGAACTTCTTGCCAATGTTTCATGTGTTTGGATTGGCTTGTATAACATATGCGCAGCTGCAGAAAGGAAACAGCATTGTCTCTATGCCAAAGTTTAACCTGGAGAAGGCCTTGTGGGCAGTGGAGAAGTACAAGGTGACAGATATGTGGGTTGTGCCGCCTGTTGTGCTTGCTTTAGCAAAGCAGAGTGTGGTGAAGAAGTACAACCTTTCATCTGTGAAGCGTGTTGGTTCTGGGGCTGCACCTCTTGGGAAGGAATTAATGGAGGAATGTGCTAATAACATTCCCAGTGCTGTGGTTCTCCAGGGTTATGGTATGACTGAGACTTGTGGAGTTGTTGCTTTGGAGAATCCAGAAGTTGGCAAACGAAATTCTGGTTCAGCTGGAACACTTGCCTCTGGTGTGGAGGCTAAAATAGTCAGTGTAGATACTTTGAAGCCTCTACCTCCTAATCAATATGGAGAGATACATGTTCGGGGACCAAACATGATGCGGGGTTATTTCAACAATCCAGAAGCCACCAAGCAAACTATTGATAAATATGGCTGGGTGCATACTGGAGACCTTGGATACTTCGATGAAAATGGTCAGCTTTATGTTGTCGACCGAATCAAGGAACTCATCAAGTACAAAGGTTTTCAGGTTGCTCCAGCTGAGCTTGAAGCACTGTTGGTTTCTCACCCTGAGATACTAGATGCTGTTGTCATCCCCTACCCCGATGCTGAAGCTGGAGAAGTTCCAATCGCATATGTTGTTCGATCTGCCAATAGTTCTTTGACCGAAGAGGACATCCTTAAATTCATTGCTGATCAGGTTTCTCCTTACAAAAGGTTAAGAAGAGTGACATTCATCAGCAGTGTTCCCAAGTCTGTTTCTGGGAAAATCCTCAGGAGAGAACTCATTGAAAAAGTAAGAGCTAAAATTTAA 1632 43.14 MEKSGYGRDGIFRSLRPPLVFPKDPNLSMISFLFRNSCSYPNRLAIVDAESSDSVSYSQLKASAIRVSNGLIQLGIEKNDVVLIFAPNSVQFSVCFIGIIAIGAIVTTCNPVYTVSELTKQVKDAKPKLVISVAELWDKVKDLNIPTVLLDQQIPSAIHSSKILCFNDLMNMAGDKSGSEFPIVGVKQSDTAALLYSSGTTGASKGVILTHRNFITSSLMITMDQTFRGEEHGVYLNFLPMFHVFGLACITYAQLQKGNSIVSMPKFNLEKALWAVEKYKVTDMWVVPPVVLALAKQSVVKKYNLSSVKRVGSGAAPLGKELMEECANNIPSAVVLQGYGMTETCGVVALENPEVGKRNSGSAGTLASGVEAKIVSVDTLKPLPPNQYGEIHVRGPNMMRGYFNNPEATKQTIDKYGWVHTGDLGYFDENGQLYVVDRIKELIKYKGFQVAPAELEALLVSHPEILDAVVIPYPDAEAGEVPIAYVVRSANSSLTEEDILKFIADQVSPYKRLRRVTFISSVPKSVSGKILRRELIEKVRAKI 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3962252 3964934 - CaPI482276_03g002820.1 Cam03g0282 122548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0282 543 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 440 - -
Cam03g0282 543 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Cam03g0282 543 Gene3D - 10 440 IPR042099 -
Cam03g0282 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 535 - GO:0016405(PANTHER)
Cam03g0282 543 FunFam 4-coumarate--CoA ligase 2 441 542 - -
Cam03g0282 543 Gene3D - 441 542 IPR045851 -
Cam03g0282 543 SUPERFAMILY Acetyl-CoA synthetase-like 17 541 - -
Cam03g0282 543 CDD 4CL 21 535 - -
Cam03g0282 543 Pfam AMP-binding enzyme 39 403 IPR000873 -
Cam03g0282 543 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0457 Cam-Chr1:4870377 Cam03g0282 Cam-Chr3:3962252 2.10E-50 dispersed
Cam03g0282 Cam-Chr3:3962252 Cam10g1974 Cam-Chr10:33665979 5.20E-193 dispersed
Cam03g0282 Cam-Chr3:3962252 Cam10g1398 Cam-Chr10:27656377 1.20E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0282 K01904 - csv:101220141 1009.98