Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0356 ATGGCAGATCGGAATCACTTTAACGCCGCCCATTTCGTTGATCTTCGAAGCGGTTTCTGTCCTCAGACGCAGATTTTCCACAGCCTCCGACCACCGCTCTCACTTCCACCATTATCTCAGCCTCTCTCCGTCACCGAACACGCTCTTTCTCTCCTTCAATCATCCCCTCCCCCTGCAAACGCCACCGTTCTCATCGACTCCAACTCCGGCTTCCATCTCTCCTACGCCATTTTCATCCGTCAAATTCGAACCCTCGCCTCAAATCTCAAAGCTTTAACCTCCCTCTCCAATGGACAAGTGGCGTTTATTCTCGCTCCTACTTCTCTGCAAGTCCCTGTGTTGTATTTCGCTCTGTTATCTCTCGGTGTCATTCTCTCTCCGGCAAATCCAACCGGTTCCGAATCAGAGATTTCTCATCAGATTCGACTCAGTAAACCGGTCATTGCCTTCGCTACATCCTCAACGGCGTCCAAGCTCCCTAGGTTTCGATTCGGAACCGTCCTGATCGATTCACCTCATTTCCTCTCCATGATGACTGAAATCAACAGATCCGATCGTCTCACCGACATCAAAATCGATCAGTCCGACTCGGCGGCGATTCTGTACTCGTCAGGTACCACAGGGCGAGTGAAAGGCGTGTTACTGAGTCATCGGAATCTTATTGCGGTGAACTCAGGGCGTACTGCTCTTCAATCGGAGATCAAAGAAGGAGAAATGGAGCCACATCCGGTTTCTCTGTGTCTGTTGCCTTTGTTCCATGTTTTCGGATTCGTGATATTGCTTCGAGCGATTTCGCGAGGAGAAACGTTGGTTCTGATGCAGAGATTCGATTTCGAAGCGATGCTAAGAGCAGTGGAGAAGTTTAGGGTTATGTACATCCCTGTTTCTCCGCCGCTTGTGGTGGCGATGGCGAAGTCGGAACTGGTGGCGAAATACGATCTCAGTTCTCTTAAAGTTTTGGGGTGCGGCGGCGCTCCCCTTGGGAAAGAAGTGATCGATAAATTCCATCAGAAATTGCCCAACGTTGAAATTGTCCAGGGATATGGCTTGACAGAGAGTACAGCGGGGGCAGCAAGAACTCTGGGGCCTGAGGAAACCAACAACACCAATTCAGTAGGTCGCTTATCTGAAAATATGGAAGCCAAGATAGTGGATCCTGCATCTGGAGAGGCCTTACCTCCTGGCCACAAAGGAGAGCTTTGGCTGCGAGGTCCTGTAATCATGAAAGGTTATGTTGGAGATGACAAGGCAACTAATGAAACCTTACATCCAAATGGATGGCTAAAGACTGGTGATCTTTGCTATTTTGATTCTGATGGATTCCTGTACATTGTTGATAGATTAAAAGAATTGATCAAGTACAAGGCTTATCAGGTCCCACCTGCAGAATTGGAACATTTGCTTCAATCCAACCCTGAAATAATTGACGCTGCCGTGATACCCTATCCTGATGAAGAAGCTGGAGAGATTCCTATGGCTTATGTTGTTAGAAAGCCTGGAAGCAATATCACCGAGGCCCAAGTTATTGATTTCATTGCAAAACAGGTTGCGCCGTACAAGAAAATTCGACGAGTTTCTTTTATCGACGCAATCCCGAAATCGCCTGCAGGGAAGATTCTAAGGAGGGAGCTTGCGAAACATGCTCTCTCACATGGTTCTAATAAGTTGTAA 1671 47.94 MADRNHFNAAHFVDLRSGFCPQTQIFHSLRPPLSLPPLSQPLSVTEHALSLLQSSPPPANATVLIDSNSGFHLSYAIFIRQIRTLASNLKALTSLSNGQVAFILAPTSLQVPVLYFALLSLGVILSPANPTGSESEISHQIRLSKPVIAFATSSTASKLPRFRFGTVLIDSPHFLSMMTEINRSDRLTDIKIDQSDSAAILYSSGTTGRVKGVLLSHRNLIAVNSGRTALQSEIKEGEMEPHPVSLCLLPLFHVFGFVILLRAISRGETLVLMQRFDFEAMLRAVEKFRVMYIPVSPPLVVAMAKSELVAKYDLSSLKVLGCGGAPLGKEVIDKFHQKLPNVEIVQGYGLTESTAGAARTLGPEETNNTNSVGRLSENMEAKIVDPASGEALPPGHKGELWLRGPVIMKGYVGDDKATNETLHPNGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSNPEIIDAAVIPYPDEEAGEIPMAYVVRKPGSNITEAQVIDFIAKQVAPYKKIRRVSFIDAIPKSPAGKILRRELAKHALSHGSNKL 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4715724 4720622 - CaPI482276_03g003560.1 Cam03g0356 122622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0356 556 Gene3D - 34 449 IPR042099 -
Cam03g0356 556 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Cam03g0356 556 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Cam03g0356 556 CDD 4CL 47 544 - -
Cam03g0356 556 FunFam 4-coumarate--CoA ligase 2 450 551 - -
Cam03g0356 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 544 - GO:0016405(PANTHER)
Cam03g0356 556 Pfam AMP-binding enzyme 58 411 IPR000873 -
Cam03g0356 556 SUPERFAMILY Acetyl-CoA synthetase-like 60 550 - -
Cam03g0356 556 Gene3D - 450 550 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0356 Cam-Chr3:4715724 Cam05g1685 Cam-Chr5:25147594 8.70E-135 dispersed
Cam03g0356 Cam-Chr3:4715724 Cam03g0357 Cam-Chr3:4725657 4.30E-251 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0356 K01904 - csv:101213796 934.48