Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0357 ATGGCTGCCCATTCCGTTGATTCCCGCAGCGGTTTCTGTCCTCAAACCAAGATTTACAAGAGCCTCCGACCACCCTTCTCGCTTCCGCCGTTATCTCAGCCACTCACCGTTGCCGGACATGCTCTTTCTGTTCTCCGATCATCTCTTCCTCCGCCGAACACTGCTGCTCTCGTCGACTCCGACTCCGGCGTCACTGTCTCTTACGCCCTTTTCCTCCGTCAAATCCGAAACCTCACCTCTAACCTTAGAGCTCTTTACTCCTTCTCCAATGGTCAAGTGGCTTTTATTCTTTCACCGACTTCTCTGCAAATTCCTGTGTTGTATTTCGCTCTCTTATCTCTCGGCGTTATTGTCTCTCCGGCTAATCCAATCAGTTCCGAATCGGAGATTGCTCACCAGGTTAGTCTCTGTAAACCGGTCATTGCCTTCGCTACTTCCTCAACGGCGTCCAAGCTCCCGAGGCTTCCACTTGGTACTGTACTGATAGATTCGCCGGAGTTTCTATCTATGATGACTGAAATTAGTCGATTGGAAGGAGTAAACGATGGCATTGTGGACGGAGAAATCAATCAAAACGACTCCGCGGCGATTCTTTACTCTTCAGGGACTACCGGACGAGTGAAAGGCGTCTTACTCTCTCACCGGAACCTCATATCGGCGATCTCTGGGGTTCAAGTATTGGAGAAAACGCCCGTCGAAGGAGAGATTGAGCCACATCCCGTTGCTCTGTGTCTATTACCTCTGTTCCATGTTTTCGGGTTCTTTATGTTGTTTCGATCGATTTCAGAGGGCAATACATTGGTTCTGATGCGTAAATTCGATTTCCAGAGGATGTTAGGAGCAGTGGAGAAGTATAGGGTTACATACATTCCGGTTTCTCCGCCGCTGGTGGTGGCGATGGCCAAATCGGAGTTGGTGGCTAAGTATGATCTCAGCTCTCTTCAAATTTTGGGATGCGGCGGCGCTCCTCTTGGTAAAGAAGTCATTGATAAATTCCGTCTCAGGTTTCCCAACGTAGAAATTATACAGGGATATGGCTTGACAGAGAGTTCAGGAGCGGCATCAAGAACTGTGGGGCCTGAAGAATGCAGTAATGCAGGTTCAGTAGGTCGCCTATCTGAAAATATGGAAGCCAAAATAGTTGATCCTTCGTCTGGAGAAGCCTTACCTCCTGGTCACAAAGGAGAACTTTGGCTGCGAGGTCCAGGAATCATGAAAGGTTATGTTGGAGATGAAAGGGCAACCGCTGAAACCTTGCATCCTGAGGGATGGCTAAAGACTGGTGACCTTTGTTACTTTGATTCCGATGGATTTCTCTACATCGTTGATCGATTAAAAGAATTGATTAAGTACAAGGCTTATCAGGTCCCACCTGCTGAATTGGAACATTTGCTTCAATCCCATCCCGAGATCCTTGACGCTGCTGTGATACCCTATCCTGATGAAGAAGCCGGAGAGATTCCATTAGCTTATGTGGTTAGAAAGCCCGAAAGTAATATCAGTGCGACTCAAGTCATGGATTTCATTGCAAAACAGGTTGCACCATACAAGAAAATCCGACGAGTTTCTTTTGTCAACACAATCCCGAAATCGCCTGCAGGGAAGATTCTTAGGAGGGAGCTTGTCCAACATGCTCTCTCTCATGGTTCTAGCAAGCTATAA 1662 47.65 MAAHSVDSRSGFCPQTKIYKSLRPPFSLPPLSQPLTVAGHALSVLRSSLPPPNTAALVDSDSGVTVSYALFLRQIRNLTSNLRALYSFSNGQVAFILSPTSLQIPVLYFALLSLGVIVSPANPISSESEIAHQVSLCKPVIAFATSSTASKLPRLPLGTVLIDSPEFLSMMTEISRLEGVNDGIVDGEINQNDSAAILYSSGTTGRVKGVLLSHRNLISAISGVQVLEKTPVEGEIEPHPVALCLLPLFHVFGFFMLFRSISEGNTLVLMRKFDFQRMLGAVEKYRVTYIPVSPPLVVAMAKSELVAKYDLSSLQILGCGGAPLGKEVIDKFRLRFPNVEIIQGYGLTESSGAASRTVGPEECSNAGSVGRLSENMEAKIVDPSSGEALPPGHKGELWLRGPGIMKGYVGDERATAETLHPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQSHPEILDAAVIPYPDEEAGEIPLAYVVRKPESNISATQVMDFIAKQVAPYKKIRRVSFVNTIPKSPAGKILRRELVQHALSHGSSKL 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4725657 4728851 - CaPI482276_03g003570.1 Cam03g0357 122623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0357 553 CDD 4CL 29 541 - -
Cam03g0357 553 Gene3D - 34 446 IPR042099 -
Cam03g0357 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 541 - GO:0016405(PANTHER)
Cam03g0357 553 FunFam 4-coumarate--CoA ligase 2 447 548 - -
Cam03g0357 553 SUPERFAMILY Acetyl-CoA synthetase-like 51 547 - -
Cam03g0357 553 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Cam03g0357 553 Pfam AMP-binding enzyme 52 408 IPR000873 -
Cam03g0357 553 Gene3D - 447 547 IPR045851 -
Cam03g0357 553 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0357 Cam-Chr3:4725657 Cam05g1685 Cam-Chr5:25147594 7.80E-136 dispersed
Cam03g0356 Cam-Chr3:4715724 Cam03g0357 Cam-Chr3:4725657 4.30E-251 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0357 K01904 - csv:101211791 977.622