Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam03g0367 | ATGGTTTCAACGAGAAGAAGTGGATCTCTCTCTGGTAGCAATAGCAAAAGATCTTCGTCCTCGGAGGATAAGCCATCGTCACCCAAGCGTCAAAAGGTGGAAAATGGGTGTGGCTCAGAGAAATCGATGCCGGCGGCGGAGAATTCTAAGGAATTATGCACCGCGCCGACTGTGGATCCCGGAGAGCATGGACCTGGCGGTGGTCCGATCGCTGGAGTTGACGTGGGAGAAGGTGTGAGCTCTTTGAAGGAGGATGCTGCACCAGCGGCCGTCGCTCTTACCACTCCTATCGCCGAGGGAACTTCGCTGGTAGGGGATAAGCCTAGGAGTTCATTTTCATCATGGAGTCACTATGCTGCGAAGCAGAATCCAAATTTTGAAACGACAACTCCTTGGTGTAGGCTTCTCTCACAGTTCGGTCAGAACTCCAATGTTGATATTTTCTCGTCAAATTTTACCATTGGTTCTAGTAGAGGTTGCAACTTTCCCTTGAAGGATCACACAATTAGTGGGACACTTTGCAAGATCAAGCACACTCAGCGTGACGGTAGTGCTGTGGCTGTGCTTGAAAGTACGGGAGGCAAGGGATCGGTGATGGTTAATGGGTTGACTGTCAAGAAGAGCACCAACTGTGTGCTAAATTCGGGTGACGAGGTGGTCTTTGGTGCTTTGGGGAATCATGCTTATATATTTCAGCAACTTATGAATGAGGTTTCAGTTAAAGGTCTAGATGTTCAGAGTGGTGTTGGAAAATTCTTGCAGCTCGGAAAGAGGACTGGCGATCCGTCTGCTGTGGCCGGGGCCTCGATCTTGGCATCTCTTTCAAGTCTCAGGCAGGATATTTCACGTTGGAAGCCTCCTTCTCAGACCAGCAGTAAAACACACCAAGAAGTACGAAATGATAAAGCTGTAGACTCAAGCACAACTAACAGGAATCTTCATCCCGGCTCCAATCCAGATGCTGTCATAGAGGTAATGGAAGAAAGAAACCAGTGGATTGGAGAGTTGCAGCCAGCATCAACTTCGGGAATGTCTTTGCGGTGTGCAGCCTTTAAAGAAGATGTTCTTGCAGGGATTGTTGATGGAAGGGACTTAGAAGTTTCATTTGACAACTTTCCATACTATTTGAGTGAGAATACGAAGAATGTGCTTATTGCTGCTTCTTTCATACACTTGAAGCATAAAGAACATTCAAAGTATACCTCAGAATTAAATACGGTGAATCCACGAATTCTACTTTCTGGTCCCGCTGGTTCAGAGATATATCAAGAGATGCTAGCAAAGGCACTTGCCAACTACTATGGTGCTAAGCTACTCATATTTGATAGCCATTCATTTTTGGGCGGTTTATCATCAAAGGAAGCAGAGCTGTTGAAGGATGGAATAAATGCAGCAAAGTCTTGTAGCTGTTCTAAACAGAGTATGGCATCTACTGAGACCACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACTCCAAGCTCTTCAAATGCTACTTTATTCACCCCTGATTCCCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTGGGACAGCAAAGAATAACTTTTTAAAAATTGGTGATAGAGTAAGATTTATAGGTTCAGCTTCTGGGGGGATATATCCTACAACATCTCCCTCAAGGGGCCCACCCAATGGAACTCGTGGAAAGGTTGTATTAACTTTTGACAACAACTCTTCGTCAAAAATTGGTGTTAAGTTTGATAAACTTATACCTGATGGAGTTGATCTTGGGGGATATTGTGAAGGAGGCTATGGATATTTCTGTAATGCAACCGATCTTCGTTTGGAGAACTCTGGCGTGGAAGAATTGGATAAGATACTTATTGATATTTTATTTGAGGCGGTATTTAGTGAAAGCAGAAATTGTCCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTCTTGTCGGAAATTTAGACTCCTATTCTACTTTTAAAATTAGACTGGAAAAGCTTCCTGACAATGTTATAGTAATTGGCTCTCATACTCATACTGACAACCGCAAAGAGAAGTCGCATCCTGGTGGCCTGCTTTTCACGAAATTTGGCAGCAATCAAACTGCTCTTCTTGACTTGGCATTTCCGGATAGTTTTGGAAGACTACATGACAGAGGAAAGGAAGTTCCAAAAGCAACAAAACTTCTTACTAAACTATTTCCCAATAAAGTTACAATCCATATGCCGCAGGATGAGGGCCTTCTTGTGTCATGGAAACACCAGTTAGAACGAGATGCCGAAACTCTCAAAATGAAGGGAAATCTGAATCAATTGCGCGTTGTTTTGAGTAGGAGTGGGATGGATTGCGAAGGTTTAGAGACATTATGCATCAAGGATCAAACACTTACGAACGAGAGTGCGGAGAAGGTAGTTGGATGGGCCTTAAGCCATCATTTAATGCAGAATCTAGAAGCCGATCCTGATTCTAGAGTTCTTTTGTCTAGTGAGAGCATTCAATACGGGATCAGCATCTTACAGGCTATCCAGAATGAATCTAAGTGCTTGAAGAAGTCACTTAAGGATGTTGTCACGGAGAATGAATTTGAGAAAAGGCTTTTAGCAGACGTTATCCCACCCAGTGATATAGGAGTCACATTTGATGATATTGGAGCTCTTGAAAATGTGAAGGATACTCTAAAGGAGTTGGTGATGCTTCCTTTACAAAGGCCCGAACTTTTCTGCAAGGGGCAATTGACCAAGCCATGCAAAGGTATTCTGTTATTTGGCCCACCTGGAACAGGTAAGACGATGCTTGCAAAAGCTGTTGCTACTGAAGCTGGTGCAAATTTTATCAACATTTCCATGTCAAGCATTACGTCAAAGTGGTTCGGTGAGGGTGAGAAGTATGTAAAAGCTGTTTTCTCTCTAGCCAGTAAAATTGCCCCAAGTGTTGTATTTGTTGATGAAGTTGACAGCATGTTGGGTCGAAGAGAAAATCCAGGAGAACATGAGGCCATGCGGAAGATGAAAAATGAATTTATGGTGAACTGGGATGGTTTGCGAACAAAGGACACAGAAAGGGTGCTGGTTCTTGCAGCCACAAACAGACCTTTTGACCTTGATGAAGCTGTTATTCGAAGGCTTCCTCGTAGGTTGATGGTGAATTTGCCAGATGCTCCAAACAGAGCAAAAATACTTAAAGTTATTTTGGCAAAAGAAGATTTGTCTCCAGAATTTGATTTTGATTCGGTTGCTAGTATGACAGATGGATACTCTGGGAGTGACCTTAAGAATCTTTGTGTTGCTGCTGCTCACCGTCCAATTAAAGAGATATTGGAGAAGGAAAAAAAGGAGCGAGCTGCAGCTCTTGCAGATGGCAGGCCTGCTCCAGCCCTTAGTGGAAGTGAGGATATTCGGCCTCTAAATATGGATGACTTTAAATATGCTCATGAACGGGTATGTGCGAGTGTTTCGTCGGAGTCTGTAAACATGACAGAGCTGTTACAGTGGAACGAGCTCTACGGTGAAGGGGGTTCTAGGAGAAAGAAGGCTCTTAGTTACTTCATCGTTGCTGCCGGCGGTAAGCCTCCGATCACCCAATTTGGAATTCGCTATTATAATTATCATATGAAAACAACGGATGTTAACTTGTTTAACTTTTTGAATAGAAGGAAATCACATCAGTTCGCAATGGCGGTCTCATTGAGCGATGTCAAGTCGGCAGCCGGTCTAAAAAAGCTCGACGAGTACCTGCTCAGTCGTAGTTACATTTCTGGCTATCAAGCTTCAAAAGATGATATCGCTGTTTACGAAGCTATCTCCAAACCCGTTTCCAGCGAATATGTCAACGTATCTAGGTGGTTCAATCACATCGAAGCACTCTTGAGAGCCTCTGCTGGGTTTGGAGAGGGTTCTGGCGTTAAGTTCGATGCAGAAGCAATCGCAACCCCACCAGCTGCCGATGCTAAGGCTAGTGCTGATGACGACGATGACGACGATATGGATCTGTTTGGTGAAGAGACTGAAGAGGAAAAGAAGGCTGCCGAAGAGCGCGCAGCTGCCATCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGAAAATCATCAGTTTTGATGGATATCAAGCCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCCGTAAGAAGTGTTCAGATGGAAGGATTGCTTTGGGGAGCATCCAAACTCGTCCCTGTTGGATATGGTATTAAGAAACTGCAGATAATGCTCACAATTGTTGACGACCTTGTAGTTGTGATATCGTTGCCTTCAACAAAATCTAAGATTGAGCTTTTTGCCAAGTCCAGGAGCTGGTCATTCCAAAGATGA | 4323 | 43.86 | MVSTRRSGSLSGSNSKRSSSSEDKPSSPKRQKVENGCGSEKSMPAAENSKELCTAPTVDPGEHGPGGGPIAGVDVGEGVSSLKEDAAPAAVALTTPIAEGTSLVGDKPRSSFSSWSHYAAKQNPNFETTTPWCRLLSQFGQNSNVDIFSSNFTIGSSRGCNFPLKDHTISGTLCKIKHTQRDGSAVAVLESTGGKGSVMVNGLTVKKSTNCVLNSGDEVVFGALGNHAYIFQQLMNEVSVKGLDVQSGVGKFLQLGKRTGDPSAVAGASILASLSSLRQDISRWKPPSQTSSKTHQEVRNDKAVDSSTTNRNLHPGSNPDAVIEVMEERNQWIGELQPASTSGMSLRCAAFKEDVLAGIVDGRDLEVSFDNFPYYLSENTKNVLIAASFIHLKHKEHSKYTSELNTVNPRILLSGPAGSEIYQEMLAKALANYYGAKLLIFDSHSFLGGLSSKEAELLKDGINAAKSCSCSKQSMASTETTKNTDQVTGEEDTPSSSNATLFTPDSQPKMEMDSIPSSSGTAKNNFLKIGDRVRFIGSASGGIYPTTSPSRGPPNGTRGKVVLTFDNNSSSKIGVKFDKLIPDGVDLGGYCEGGYGYFCNATDLRLENSGVEELDKILIDILFEAVFSESRNCPFILFMKDAEKSLVGNLDSYSTFKIRLEKLPDNVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKATKLLTKLFPNKVTIHMPQDEGLLVSWKHQLERDAETLKMKGNLNQLRVVLSRSGMDCEGLETLCIKDQTLTNESAEKVVGWALSHHLMQNLEADPDSRVLLSSESIQYGISILQAIQNESKCLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPEFDFDSVASMTDGYSGSDLKNLCVAAAHRPIKEILEKEKKERAAALADGRPAPALSGSEDIRPLNMDDFKYAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFIVAAGGKPPITQFGIRYYNYHMKTTDVNLFNFLNRRKSHQFAMAVSLSDVKSAAGLKKLDEYLLSRSYISGYQASKDDIAVYEAISKPVSSEYVNVSRWFNHIEALLRASAGFGEGSGVKFDAEAIATPPAADAKASADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVVVISLPSTKSKIELFAKSRSWSFQR | 1440 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4798803 | 4816113 | - | CaPI482276_03g003670.1 | Cam03g0367 | 122633 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam03g0367 | 1440 | Gene3D | - | 131 | 240 | - | - | |
Cam03g0367 | 1440 | SMART | AAA_5 | 911 | 1048 | IPR003593 | GO:0016887(InterPro) | |
Cam03g0367 | 1440 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 144 | 1178 | IPR051701 | GO:0005741(PANTHER) | |
Cam03g0367 | 1440 | Gene3D | - | 873 | 1154 | IPR027417 | - | |
Cam03g0367 | 1440 | SUPERFAMILY | eEF-1beta-like | 1353 | 1422 | IPR036219 | - | |
Cam03g0367 | 1440 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein | 873 | 1049 | - | - | |
Cam03g0367 | 1440 | Coils | Coil | 1328 | 1348 | - | - | |
Cam03g0367 | 1440 | MobiDBLite | consensus disorder prediction | 22 | 36 | - | - | |
Cam03g0367 | 1440 | MobiDBLite | consensus disorder prediction | 1315 | 1329 | - | - | |
Cam03g0367 | 1440 | Pfam | ATPase family associated with various cellular activities (AAA) | 915 | 1045 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Cam03g0367 | 1440 | FunFam | Elongation factor 1-beta 1 like | 1350 | 1435 | - | - | |
Cam03g0367 | 1440 | Gene3D | - | 1047 | 1141 | - | - | |
Cam03g0367 | 1440 | Pfam | EF-1 guanine nucleotide exchange domain | 1358 | 1426 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cam03g0367 | 1440 | Gene3D | - | 1215 | 1290 | - | - | |
Cam03g0367 | 1440 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 1320 | 1328 | IPR001326 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cam03g0367 | 1440 | MobiDBLite | consensus disorder prediction | 473 | 519 | - | - | |
Cam03g0367 | 1440 | SUPERFAMILY | SMAD/FHA domain | 131 | 229 | IPR008984 | GO:0005515(InterPro) | |
Cam03g0367 | 1440 | Gene3D | - | 1349 | 1434 | IPR014717 | - | |
Cam03g0367 | 1440 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 874 | 1155 | IPR027417 | - | |
Cam03g0367 | 1440 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cam03g0367 | 1440 | MobiDBLite | consensus disorder prediction | 282 | 319 | - | - | |
Cam03g0367 | 1440 | SMART | EF1_GNE_2 | 1356 | 1435 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cam03g0367 | 1440 | Pfam | FHA domain | 153 | 222 | IPR000253 | GO:0005515(InterPro) | |
Cam03g0367 | 1440 | MobiDBLite | consensus disorder prediction | 1308 | 1333 | - | - | |
Cam03g0367 | 1440 | FunFam | Elongation factor 1-delta 1 | 1223 | 1298 | - | - | |
Cam03g0367 | 1440 | CDD | FHA | 134 | 232 | - | - | |
Cam03g0367 | 1440 | CDD | EF1B | 1354 | 1417 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cam03g0367 | 1440 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Cam03g0367 | 1440 | CDD | RecA-like_ATAD1 | 878 | 1044 | - | - | |
Cam03g0367 | 1440 | SUPERFAMILY | GST C-terminal domain-like | 1228 | 1286 | IPR036282 | - | |
Cam03g0367 | 1440 | Pfam | AAA+ lid domain | 1069 | 1104 | IPR041569 | - | |
Cam03g0367 | 1440 | ProSitePatterns | AAA-protein family signature. | 1018 | 1037 | IPR003960 | GO:0005524(InterPro)|GO:0016887(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0023 | Cam-Chr1:637053 | Cam03g0367 | Cam-Chr3:4798803 | 4.80E-79 | dispersed | |
Cam01g0082 | Cam-Chr1:1130530 | Cam03g0367 | Cam-Chr3:4798803 | 2.50E-144 | dispersed | |
Cam03g0367 | Cam-Chr3:4798803 | Cam09g0589 | Cam-Chr9:5850327 | 0.00E+00 | dispersed | |
Cam03g0367 | Cam-Chr3:4798803 | Cam07g0790 | Cam-Chr7:19800412 | 1.00E-150 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam03g0367 | - | - | - | 0.0 |