Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0407 ATGAAGTGGGGTGTTCTTCTTGTCCTTATTCTGGCCTCCGCCGCCGTGTCGTGGGCCGACAAAGATTTGGAGGATAACGGAGAAGAATACTCGAGCCTTGAGGTTCCGCAGTTGCAGGAGTTTTCAGCTTTCGGGGACTTTCTTTCTTATGGGTTCTACCAGAAAAGTTGTCCCGGCGTCGACGGCATCATTCACCGTAAACTCAAGCAGTGGTTCGATAAAGATAACTCCATCGCCGCCGCCCTCTTGAGATTGCACTTCCATGACTGCGTCGTTAGGGGTTGCGACGGTTCTATTCTTCTAGATTACGAGGGAAGCGAGAGAAGGGCTCCGGCGAGCAAGACGCTTAGAGGTTTCGAAGTGATCGACGACATCAAAGCTGAGTTAGAGAAACAGTGCCCTAAAACAGTTTCTTGCGCAGATATTCTAACCGCCGCCGCCAGAGAAGCCACCGTCCTCATCGGCGGCCCATATTGGATGGTACCTTATGGAAGAAGAGACGGAGTGGATTCCATTGCCAAAGAAACTGAGTTAGTACCATTGGGTATTGAAGACATCACTTCTCTCATTGAACTTTACCAATCTCTCGGCTTGAATGTCTTAGATTTGGTCGTTCTTTCAGGGGCACACACGATTGGAAGGGCAACATGTGGAGCGATACAAAACAGGCTTTACAATTATAGCGCAACGGGGAAGCCAGACCCATCGTTGAGCCCAAAATACTTAAACTTCTTGAGAAGAAAGTGCCGATGGGCGTCGGACTACGTGGATCTTGACGCAACAACGCCCAACACATTCGACAACGCCTACTACTCTAATCTCCCAAAGAAGATGGGTCTTTTGTCAACTGATTCGGCTCTCTACACCGATCCAAGAACTTCCCCCATCGTCAAAGCTTTAGCCTATCAGCCCTCCATTTTCCGTCACCAGTTTGCTGTGGCCATGGCTAAGCTTGGGAACGTTCAAGTTCTTACTGATCTTTTCGAAGGCGAGATTCGAACCAACTGCAGTTGTAGAAATTCTCATTGA 1029 48.88 MKWGVLLVLILASAAVSWADKDLEDNGEEYSSLEVPQLQEFSAFGDFLSYGFYQKSCPGVDGIIHRKLKQWFDKDNSIAAALLRLHFHDCVVRGCDGSILLDYEGSERRAPASKTLRGFEVIDDIKAELEKQCPKTVSCADILTAAAREATVLIGGPYWMVPYGRRDGVDSIAKETELVPLGIEDITSLIELYQSLGLNVLDLVVLSGAHTIGRATCGAIQNRLYNYSATGKPDPSLSPKYLNFLRRKCRWASDYVDLDATTPNTFDNAYYSNLPKKMGLLSTDSALYTDPRTSPIVKALAYQPSIFRHQFAVAMAKLGNVQVLTDLFEGEIRTNCSCRNSH 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5160364 5163290 + CaPI482276_03g004070.1 Cam03g0407 122673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0407 342 FunFam Peroxidase 51 192 - -
Cam03g0407 342 ProSitePatterns Peroxidases active site signature. 79 90 IPR019794 GO:0004601(InterPro)
Cam03g0407 342 SUPERFAMILY Heme-dependent peroxidases 48 340 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 ProSiteProfiles Plant heme peroxidase family profile. 47 340 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 Pfam Peroxidase 66 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 CDD secretory_peroxidase 48 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 313 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0407 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Cam03g0407 342 Gene3D - 51 340 - -
Cam03g0407 342 Gene3D Peroxidase, domain 2 180 318 - -
Cam03g0407 342 PANTHER PEROXIDASE 25-RELATED 49 336 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cam03g0407 342 FunFam Peroxidase 180 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1948 Cam-Chr2:32607469 Cam03g0407 Cam-Chr3:5160364 1.30E-104 dispersed
Cam03g0407 Cam-Chr3:5160364 Cam03g0418 Cam-Chr3:5208536 3.60E-200 dispersed
Cam03g0407 Cam-Chr3:5160364 Cam01g1710 Cam-Chr1:30679289 8.10E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0407 K00430 - csv:101208042 639.032