Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0499 ATGGAAGCCACCAGGAACATAGCCCATCAATTCTGTCCCTTTAGGAAAAGCGCTGTGGTTTGGTATGACGATTGTATGTTGCGTTATTCCGACCAATTTTTCTTTTCTCTTGTGTCTCCTGAGCCAAATTACGTCTTAGATAGCCGCGTTAATATTGGGTTCGACACGGCCTGGTTTAACCAAGTGTTGATGGCCACGTTGACTGCCACGGCGGCTAATGCCTCCTCGACTAATCCGATAACAACTGATCCTCCACCACCACCTCCTTCCTCAGGGGAAAGCAAAACCTCAAAGATGATAATTATAGCCATCGTGGTTCCAATTACTGCTTCCATTCTACTCTTGGTTTACACTATAAATGAGATCAACAATGTGGAAGCTCTTCAATTTCATTTCAATCAATTGATGCTGCTACTAACAATTTCTCAGAGGAAAATAGGGGGAGGCTTGAAAATGGACAAGATAGCAGTGAAAAGATTGTCAAGAGGATCCTTGCAAGGTTCTGAAGAGTTCAAGAATGAGGTCATATTGGTTGCTAAGCTTCAACATAGAAATTTAGTAAGACTATTGGGATTTTGCTTGGAGGGTGGAGAAAAGATACTTATCTATGAATACATTCCCAACAAAAGCCTTGACTATTTCCTATTTGATACTGAGGGACAGAAAGTGTTAGATTGGTTGAGTCGACATAAGATCATCAATGGAATTGCTCGAGGAATGTTATATTTACATGAAGATGAGGAAATGAATCCAAAGATTTCGGATTTTGGTATGGCAAGGATTATTCAAATGGATGAAACTCAAAGAAATACACGTCGAATTGCTGCGGTTACATGTCTCTTAGAATATGCAATGCATGGAAACTTCTCTACCAAATCTGACGTGTATAGCTTTGGAGTGTTGATGTTGGAAATTATAACCGGAAAGAAAAACTACACCTTTTATTTGTCAGGTCTTGCGGATGACATGTTGAGCTACGCTTGGAAGCTATGGAATGATGGAACTCCATTAGATCTACTCGACTCGAGTTTAAGAGACAAATACTCAAGAAATATGGTACTTAGATGCATCCATATTGCTTTACTTTGTGTTCACGATGATCCTGGACGGAGACCTTCCATGGCATCCATTGTTCTTATGTTGAATAGTTATTCGGTTACTTTGCCTGAACCTAATGAGCCAACGTTCTTCAAGAGCAATAGAAACAATGAGATTGCCATAGATGGTGATCAATCCAATAGACCGTCTTCCAATACAGTATCTGTAACTGAAATGTACCCACGATGA 1287 40.09 MEATRNIAHQFCPFRKSAVVWYDDCMLRYSDQFFFSLVSPEPNYVLDSRVNIGFDTAWFNQVLMATLTATAANASSTNPITTDPPPPPPSSGESKTSKMIIIAIVVPITASILLLVYTINEINNVEALQFHFNQLMLLLTISQRKIGGGLKMDKIAVKRLSRGSLQGSEEFKNEVILVAKLQHRNLVRLLGFCLEGGEKILIYEYIPNKSLDYFLFDTEGQKVLDWLSRHKIINGIARGMLYLHEDEEMNPKISDFGMARIIQMDETQRNTRRIAAVTCLLEYAMHGNFSTKSDVYSFGVLMLEIITGKKNYTFYLSGLADDMLSYAWKLWNDGTPLDLLDSSLRDKYSRNMVLRCIHIALLCVHDDPGRRPSMASIVLMLNSYSVTLPEPNEPTFFKSNRNNEIAIDGDQSNRPSSNTVSVTEMYPR 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5912313 5914597 + CaPI482276_03g004990.1 Cam03g0499 122765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0499 428 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 148 397 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam03g0499 428 MobiDBLite consensus disorder prediction 75 94 - -
Cam03g0499 428 Gene3D Phosphorylase Kinase; domain 1 120 205 - -
Cam03g0499 428 Pfam Protein tyrosine and serine/threonine kinase 153 379 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0499 428 SUPERFAMILY Protein kinase-like (PK-like) 154 411 IPR011009 -
Cam03g0499 428 FunFam Uncharacterized protein 141 205 - -
Cam03g0499 428 ProSiteProfiles Protein kinase domain profile. 102 396 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0499 428 MobiDBLite consensus disorder prediction 407 428 - -
Cam03g0499 428 Gene3D Transferase(Phosphotransferase) domain 1 206 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0499 Cam-Chr3:5912313 Cam05g1677 Cam-Chr5:24956488 5.80E-78 dispersed
Cam03g0499 Cam-Chr3:5912313 Cam03g0501 Cam-Chr3:5921619 1.50E-123 proximal
Cam01g2280 Cam-Chr1:35071107 Cam03g0499 Cam-Chr3:5912313 6.70E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85033 PF07714 PK_Tyr_Ser-Thr 9.20E-28 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0499 - - - 0.0