Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0508 ATGTTCCACTCAAGCCTTCTCTTTTCTATCATCATCTTCTCCTTCTTCCTCTTCATCAGCCCTGCAATTCCTCAGCCAAATACCAATTGTTCAAACGACAATGACAATTGCACAGCCAGCAGCACCTACAGAGCCACAATTATTACACCCAATTGTAATCTTGGCTATGAGATTATCAATTTCTTTGACTCTGCAGCTGTTTCCAGAGTTTCTCGGTCGACCTCGCCGCCGACACCGCCATCCCCTCTCTTACCACTCTCACCTCCCTCTCTTTCACCCAATACAACAACCAATGTCAAAGAAAAGGAGTCGAAGAGATTGAAGATTGTCATCATTATAGTTCTCCCAGTGGTTGTTGTAGTTGTGGTATTAATTGTCAGCATCTTCATCTTTTTAAGAGCAAGAAAACAAAGGGATGGAGTTGCAAGTTTACAAGTGGATGACACTGCAGATTTTGAAACTTTAGTATTTGACATCAGTACTATAAGAACTGCAATAGATGACTTCTCAGGTGAAAATTATATCGGACAAGGTAGATTTGGAGCTGTTTACAAGGGAAGCCTTGTTAATGGACAAGAAATAGCAGTGAAGTTTCTCAAAAAGAACCCCATGGAAGGAGAGAGTGAGTTTAAGAATGAAGTCCTGTCAATGGCCAAACTTCAACACCGGAATTTAGTTCGGTTTCTCGGTTTCTGCCTCCACAAAGACATGATGATTTTCGTGTCTGAGTTCGTGCAAAACTCAAGTCTTGATAAATTCATATTTGAGCCATTGAAAGGTCAAGATTTGGACTGGGGAACGCGCTACAAAATCATTCAAGGCATTGCTACAGGCCTTGTTTATCTTCATCAAGATTCTCAAATTAAAGTTGTTCATAGAGATCTCAAAGCTACAAATATTTTATTAGATGCACAAATGAATCCTAAAATTTCTGATTTTTTCATGGTAAAGTTGTTTCAAGAAGGTCCAGCTCAAGAAAATACATGTCTGGGATACATGGCTCCGGAATATTTTGTCTCCGGAATGTCGTCAAAAAAGTCAGATGTGTTTAGTTTCGGCGTGTTAGTTATTGAGATTGTGACTGGCCAAAAAATCACATCTTTCTGTGAGGAAAATGAGGGAAAGGACATATATGATCTTATATACTATGTATGGAGAAACTGGAGGGCAGGAACAATACTAAATGTTGTAGATCCTATATTGCGAGGTGGGTCAAGTAATGAAATAAAGAAATGTATCAACATTGGATTGCTTTGTGCTCAAGTAAATAAAGCTAACAGGCCAACTATGGAAACAGTACTTTCTCATGCTTAA 1314 39.04 MFHSSLLFSIIIFSFFLFISPAIPQPNTNCSNDNDNCTASSTYRATIITPNCNLGYEIINFFDSAAVSRVSRSTSPPTPPSPLLPLSPPSLSPNTTTNVKEKESKRLKIVIIIVLPVVVVVVVLIVSIFIFLRARKQRDGVASLQVDDTADFETLVFDISTIRTAIDDFSGENYIGQGRFGAVYKGSLVNGQEIAVKFLKKNPMEGESEFKNEVLSMAKLQHRNLVRFLGFCLHKDMMIFVSEFVQNSSLDKFIFEPLKGQDLDWGTRYKIIQGIATGLVYLHQDSQIKVVHRDLKATNILLDAQMNPKISDFFMVKLFQEGPAQENTCLGYMAPEYFVSGMSSKKSDVFSFGVLVIEIVTGQKITSFCEENEGKDIYDLIYYVWRNWRAGTILNVVDPILRGGSSNEIKKCINIGLLCAQVNKANRPTMETVLSHA 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5948427 5950377 + CaPI482276_03g005080.1 Cam03g0508 122774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0508 437 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 435 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam03g0508 437 Pfam Protein tyrosine and serine/threonine kinase 173 432 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0508 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0508 437 Gene3D Transferase(Phosphotransferase) domain 1 245 437 - -
Cam03g0508 437 ProSiteProfiles Protein kinase domain profile. 169 437 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0508 437 FunFam Lectin-domain containing receptor kinase A4.3 245 436 - -
Cam03g0508 437 MobiDBLite consensus disorder prediction 72 99 - -
Cam03g0508 437 Gene3D Phosphorylase Kinase; domain 1 133 244 - -
Cam03g0508 437 MobiDBLite consensus disorder prediction 75 89 - -
Cam03g0508 437 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524(InterPro)
Cam03g0508 437 SUPERFAMILY Protein kinase-like (PK-like) 149 436 IPR011009 -
Cam03g0508 437 SMART serkin_6 169 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0508 Cam-Chr3:5948427 Cam03g0511 Cam-Chr3:5972569 1.80E-87 dispersed
Cam03g0507 Cam-Chr3:5943270 Cam03g0508 Cam-Chr3:5948427 1.60E-140 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85036 PF00069 Pkinase 2.70E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0508 - - - 0.0