Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0533 ATGATAATGAAATGCTGTATGAATCTTCTTCCTCCTAAACCGGCTTTCTTCTTCATTTCGTTGTTTTTGGTAATTTTTGTTGGTAGCCAATTTAGCGTTGGCCTTGAGAATTCGAATTCTACCATTCAAATCATCAAAGATGGAGATCGGTTGACATCCAGCGACAATAATTTCGTTCTTGGATTTTTCGGTTTCAACAATTCCACCACTCGCCGATATGTCGGAATTTGGTATAATAAAATTCCTCAATTTACCCTCGTTTGGGTTGCAAATAGAAACCAACCCCTTAACGACAACACAGGAACCTTAGCCCTCGACCGCCGTGGAAACCTCCTCCTTTTCACCTCCAAACAAACCATATCTCTTTGGTCTACAAACGCTACCATTCAATCAAACGACGACGTGTTGATTAAGCTTTGGAATACGGGAAATCTCGCCCTGATTGAACGACAAAGCCAAAAGGTTATATGGCAAAGCTTTGATTATCCATCTCATGTCTTTCTTCCCTACATGAAATTGGGGTTGAACTGGCGGACCGGGATTAACTGGTTCCTAACTTCATGGAAGGCGCAGGACGATCCGGGAACTGGGAACTTCAGTTGTCGGATAGACCCAACAGGGTATCCGCAATTAATTTTGTACAAGGGGAATGATCCGCGGTGGCGGATTGGATCATGGACGGGGCACAAATGGTCTGGAGTACCTGAAATGACAAGGTCATTTATATTCAACACAACCTATATCGACAACACAGAGGAGATTTCCATAATGGACAGTGTCACAAACGACACGGTTTTAAGCAGCATGAGTCTAGACGAATCCGGTTTGTTGCATCGGTCCATGTGGAATGAAGAACAACAAAAGTGGAAAGATTATTGGACGGGTCCGACCGAGTGGTGCGACAGTTACAATAGATGCTATCCAAACACGAACTGTGACCAGTACGACACGGAGCAGTTCTATTGCAAGTGCTTACCTGGCTTCGAACCACGATCGAACCAAAGTTGGTTGCGGAGAGATCCGTCGGGTGGGTGCATCATGAAGAGGCCCAACGCCATGTGTCGTAGTGGAGAGGGATTTGTGAGGGTGTCACGTGTGAAGGTCCCGGATACGTCGATGGCACGTGCAGATTTGAGTATGAGTTTGGACGCGTGCGCACAAGCATGTGTAAATGATTGTAACTGTACGGCTTACACGAGCGCAAATGAGGCGACGGGGAGCGGGTGCGTGATGTGGTATGGAGATTTGATAGACACACGGACCTTTGCCAACACGGGTCAAGATCTATATGTAAGAGTTGATGCTATTGAATTAGCTCAATATAATCCACAAAATTCAAATCCTCATCCAACAAAGAAGGTGATATTAATTGTTGTTGCATCTTTTGTTGCATTGGTGTTACTCGTGACCTCACTAATTTGTTTATGGAAAATGATTAGAAAAAGAAGGGAGAGATCCATGAGTCTATCTAATAACTTTGAGGTCTCTCCAAATTCAAAGGAATTTGATGAAAGTAGAACAAATTCAGATTTGCCTATATTTGACTTGTTGACTATAACAAAGGCAACCGATGATTTTTCATTTAATAACAAGCTTGGAAAAGGTGGCTTTGGCACAGTTTATAAGGGCAAGCTTATGAATGGAGAGGAAATTGCAGTTAAAAGGCTGGCTAAGAATTCAGGGCAAGGAGTTGGAGAGTTCAAGAATGAAGTTACATTAATTGCAAAGCTCCAACATAGAAACCTCGTCAGAATTTTAGGCTATTGCGTTAAGAATGAAGAGAAAATGCTTGTATATGAATACTTACCAAACAAAAGCTTGGACTATTTCATCTTTGATGAAAGCAAGAGGGCTTTGCTCAATTGGAAAAAACGTTTTGAAATTATATGTGGCATCGCACGAGGAATCTTATATCTTCATCAAGATTCAAGGTTGAAAGTCATTCATCGAGATTTGAAGGCCAGCAATATACTACTAGATGCTGATTTGAATCCCAAAATCGCAGATTTTGGCATGGCAAGGATAGTTGGCCAAGATCAAATTCAAGCAAACACAAATCGCATCGTGGGAACATATGGTTATATGTCACCAGAGTATGCAATGGAAGGCCTATTTTCAGTGAAATCTGATGTTTATAGCTTTGGAGTTTTGGTGCTAGAGGTGATTACAGGCAAAAAGAACACTGGCTGTATATCCAACTACGTAAATTTGGTTGGACAAGTTTGGGAGCTCTGGAACTTGGACAATGCAATGGAATTAGTGGACTCAAGTTTGGAAGAAGGATCAAGTTGTGAATACGAAATCATGAGATGCCTCCAAATTGGGCTATTGTGTGTTCAAGAGGATCCGACTAACCGTCCGACCATGTCGAATGTGGTTTTCATGTTGGAGAATGAAGTGAGTATTCCTTCTCCAAAGAAACCTGCTTTCATTTTAAAGAGGAAAAGCAACCATGGAGATCCATCCACCAGTACTGAAGGAGCCAACTCCAGTACTACTGAGGGAGCCAACTCTCTAAATGATCTAACAATTTCCATAATCGATGCTCGTTAA 2553 42.07 MIMKCCMNLLPPKPAFFFISLFLVIFVGSQFSVGLENSNSTIQIIKDGDRLTSSDNNFVLGFFGFNNSTTRRYVGIWYNKIPQFTLVWVANRNQPLNDNTGTLALDRRGNLLLFTSKQTISLWSTNATIQSNDDVLIKLWNTGNLALIERQSQKVIWQSFDYPSHVFLPYMKLGLNWRTGINWFLTSWKAQDDPGTGNFSCRIDPTGYPQLILYKGNDPRWRIGSWTGHKWSGVPEMTRSFIFNTTYIDNTEEISIMDSVTNDTVLSSMSLDESGLLHRSMWNEEQQKWKDYWTGPTEWCDSYNRCYPNTNCDQYDTEQFYCKCLPGFEPRSNQSWLRRDPSGGCIMKRPNAMCRSGEGFVRVSRVKVPDTSMARADLSMSLDACAQACVNDCNCTAYTSANEATGSGCVMWYGDLIDTRTFANTGQDLYVRVDAIELAQYNPQNSNPHPTKKVILIVVASFVALVLLVTSLICLWKMIRKRRERSMSLSNNFEVSPNSKEFDESRTNSDLPIFDLLTITKATDDFSFNNKLGKGGFGTVYKGKLMNGEEIAVKRLAKNSGQGVGEFKNEVTLIAKLQHRNLVRILGYCVKNEEKMLVYEYLPNKSLDYFIFDESKRALLNWKKRFEIICGIARGILYLHQDSRLKVIHRDLKASNILLDADLNPKIADFGMARIVGQDQIQANTNRIVGTYGYMSPEYAMEGLFSVKSDVYSFGVLVLEVITGKKNTGCISNYVNLVGQVWELWNLDNAMELVDSSLEEGSSCEYEIMRCLQIGLLCVQEDPTNRPTMSNVVFMLENEVSIPSPKKPAFILKRKSNHGDPSTSTEGANSSTTEGANSLNDLTISIIDAR 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6181029 6185577 - CaPI482276_03g005330.1 Cam03g0533 122799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0533 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 491 601 - -
Cam03g0533 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0533 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 803 - -
Cam03g0533 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 194 IPR036426 -
Cam03g0533 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 160 - -
Cam03g0533 850 ProSiteProfiles Protein kinase domain profile. 526 810 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0533 850 Gene3D Transferase(Phosphotransferase) domain 1 602 806 - -
Cam03g0533 850 MobiDBLite consensus disorder prediction 817 836 - -
Cam03g0533 850 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 26 809 - -
Cam03g0533 850 SUPERFAMILY Protein kinase-like (PK-like) 502 796 IPR011009 -
Cam03g0533 850 Pfam PAN-like domain 354 419 IPR003609 -
Cam03g0533 850 MobiDBLite consensus disorder prediction 812 836 - -
Cam03g0533 850 Gene3D Phosphorylase Kinase; domain 1 500 601 - -
Cam03g0533 850 Pfam D-mannose binding lectin 85 189 IPR001480 -
Cam03g0533 850 ProSiteProfiles Bulb-type lectin domain profile. 36 160 IPR001480 -
Cam03g0533 850 Gene3D - 36 160 IPR036426 -
Cam03g0533 850 SMART serkin_6 526 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0533 850 SMART blect_4 42 163 IPR001480 -
Cam03g0533 850 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0533 850 CDD STKc_IRAK 532 798 - -
Cam03g0533 850 ProSitePatterns Protein kinases ATP-binding region signature. 532 554 IPR017441 GO:0005524(InterPro)
Cam03g0533 850 PIRSF SRK 7 850 IPR024171 GO:0004674(InterPro)
Cam03g0533 850 ProSiteProfiles PAN/Apple domain profile. 354 434 IPR003609 -
Cam03g0533 850 CDD B_lectin 43 163 IPR001480 -
Cam03g0533 850 SMART ntp_6 355 433 IPR003609 -
Cam03g0533 850 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544(InterPro)
Cam03g0533 850 CDD PAN_AP_plant 355 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0533 Cam-Chr3:6181029 Cam03g0537 Cam-Chr3:6221188 1.80E-192 dispersed
Cam03g0533 Cam-Chr3:6181029 Cam03g0534 Cam-Chr3:6192372 0.00E+00 tandem
Cam09g0210 Cam-Chr9:2751518 Cam03g0533 Cam-Chr3:6181029 3.50E-127 transposed
Cam01g2300 Cam-Chr1:35192918 Cam03g0533 Cam-Chr3:6181029 5.80E-178 wgd
Cam10g0584 Cam-Chr10:8981569 Cam03g0533 Cam-Chr3:6181029 2.00E-189 wgd
Cam02g0158 Cam-Chr2:2627622 Cam03g0533 Cam-Chr3:6181029 5.40E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85039 PF07714 PK_Tyr_Ser-Thr 9.50E-50 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0533 - - - 0.0