Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0535 ATGACAATGGCGTCACAGAAGCCATGGGAGAACGGATTTGCAGTCAACGGAGAAGGAAACATCATTCTTCTCAACGAAACAGGTGGAGTCTTATGGTCTTCTCCTTCTCCAGGATCAATGAAACAACCCGTCGCTCAGCTGCTAAACACAGGTAATTTGGTTTTAGGAGAATCTGGGTCTGAGAATTATGTATGGCAGAGTTTTGATTATCCTTCTGATACTCTGTTACCGGGAATGAAACTGGGTTGGGACTCGAAAACCGGTCTGAACCGGAAGTTAACGTCTTGGAAAAGCTCGAACGATCCCTCGTCTGGGGCTTTCACTTACAGTATTGAAACGGATGGGCTTCCCCAATTTGTAATTCGCGAAGGACCCACCATAACTTTTCGAGGCGGCCCATGGTACGGTAATAGATTTAGTGGAAGTGGTGCACTCAGAGATACCGCAATTTATTCCCCAAAGTTCGATTATAACGCTACCGAAGCTTTCTTTTCATATGATGCTGCGGATAATCTCTCTGTAAGACTGGTATTGAACGCGGCTGGGTTTTTTCAACAGTTTTATTGGGTCGATGATGGAAAATATTGGAACCCTTTGTATATAATGCCAGGAGATCGCTGTGACGTCTATGGACTTTGTGGGGATTTTGGAGTTTGTACATTTTCGCTCACAGCAGAATGTGATTGTATGGCTGGGTTTGAACCCAAATCGCCTAACGATTGGGAAAGGTTTAGATGGTCTGATGGTTGTGTTAGAAGGGACAATCGCACCTGTGGAAATGGAGAGGGGTTTAAAAGAATTAGCAGTGTGAAATTGCCAGATTCTTCAGGGAATTTGGTGAATGTTAATACAAGCATTGTTGATTGTGAGGCGGCGTGCTTAAACAACTGCTCTTGCTTGGCTTATGGAATAATGGAGCTTCCAACAGGCGGCTATGGCTGCGTTACCTGGTTTCATAAACTGGTGGATGTTAAATTCGTTCTTGAAAATGGACAAGATCTTTATGTGAGAGTGGCGGCTTCAGAACTTGGCTCGTCCAAGAAGAAGCTTTTGGTTGCAATATGTGTGTCTGTGGCTTCATTTTTAGGCTTCTTGGCCTTTGTCATTTGCTTGATCCTTGGGCGTAGAAGGAAAGTTAAAGGTAATGTGATCTCTCCTGATATCACTGAAGGTCATATTCAATCTCAAGAAAATGAAGTGGAAATGCCAATCTTTGATTTTACAACGATCGAGATTGCGACGAATGGTTTCTCTTTTTCGAATAAGATAGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGAAAGCTTCCTTGTGGACAAGAGATTGCAGTAAAGAGACTGGCTGAGGGCTCTGGCCAAGGGCAAAGTGAGTTCAAAAATGAGGTTTTGTTGATCTCACAACTTCAGCATCGAAATCTTGTCAAGCTTCTTGGTTTCTGCATTCACCAACAAGAAACATTGCTGATCTATGAATATATGCAAAACAAAAGTTTAGACTATTTCCTATTCGATAATAAGAGGCGATCTTTACTGAATTGGCAAAAGAGATTGGACATCATAATTGGGATAGCTCGAGGACTTCTTTATCTTCATAGAGATTCAAGACTGAGAATAATACATAGGGACCTCAAAGTAAGTAATATATTGCTAGACAATGAAATGACTCCAAAAATTTCAGACTTTGGTATGGCACGCATGTTTGGGGAAGATCAAAATATGACCAAAACCAAAAGAGTTGTTGGGACCTATGGTTATATGTCTCCAGAATATGCACTCGACGGATGTTTTTCATTGAAATCAGATGTATTTAGCTTCGGGGTAATTCTTTTGGAAATAGTTAGCGGTAAGAAGAACAGAGGCTTCTTCCATACCAATCATCAACTAAATCTTCTCGGACATGCATGGAAGCTTTGGGATGAAGAAAATGCTTTGGAGTTAATGGATGCAGCTTTGGAGGATGAATTCCAACCTTCTCAAGCCCTGCGATGCATTGAAGTAGGGCTTTTGTGTGTTCAACAGAACCCTGATGAAAGGCCGACTATGTGGTCAGTACTTTCAATGTTGGAGAGTGAAAATGTATTGTTGTCTCATCCTAAACAACCTGGATTTTACATGGAAAGAATGTTTTCTAAGAATTTATCGGCCGAAACCTCCACTTCCAATGAAGTGACGGTTACATCGCTACACGGTCGTTAG 2196 41.85 MTMASQKPWENGFAVNGEGNIILLNETGGVLWSSPSPGSMKQPVAQLLNTGNLVLGESGSENYVWQSFDYPSDTLLPGMKLGWDSKTGLNRKLTSWKSSNDPSSGAFTYSIETDGLPQFVIREGPTITFRGGPWYGNRFSGSGALRDTAIYSPKFDYNATEAFFSYDAADNLSVRLVLNAAGFFQQFYWVDDGKYWNPLYIMPGDRCDVYGLCGDFGVCTFSLTAECDCMAGFEPKSPNDWERFRWSDGCVRRDNRTCGNGEGFKRISSVKLPDSSGNLVNVNTSIVDCEAACLNNCSCLAYGIMELPTGGYGCVTWFHKLVDVKFVLENGQDLYVRVAASELGSSKKKLLVAICVSVASFLGFLAFVICLILGRRRKVKGNVISPDITEGHIQSQENEVEMPIFDFTTIEIATNGFSFSNKIGEGGFGPVYKGKLPCGQEIAVKRLAEGSGQGQSEFKNEVLLISQLQHRNLVKLLGFCIHQQETLLIYEYMQNKSLDYFLFDNKRRSLLNWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKVSNILLDNEMTPKISDFGMARMFGEDQNMTKTKRVVGTYGYMSPEYALDGCFSLKSDVFSFGVILLEIVSGKKNRGFFHTNHQLNLLGHAWKLWDEENALELMDAALEDEFQPSQALRCIEVGLLCVQQNPDERPTMWSVLSMLESENVLLSHPKQPGFYMERMFSKNLSAETSTSNEVTVTSLHGR 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6207509 6210837 - CaPI482276_03g005350.1 Cam03g0535 122801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0535 731 Pfam Protein tyrosine and serine/threonine kinase 418 687 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0535 731 Pfam Domain of unknown function (DUF3403) 690 731 IPR021820 GO:0004674(InterPro)
Cam03g0535 731 CDD PAN_AP_plant 255 339 - -
Cam03g0535 731 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 384 492 - -
Cam03g0535 731 ProSiteProfiles PAN/Apple domain profile. 258 339 IPR003609 -
Cam03g0535 731 Gene3D - 3 68 IPR036426 -
Cam03g0535 731 SMART serkin_6 417 688 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0535 731 ProSiteProfiles Bulb-type lectin domain profile. 1 68 IPR001480 -
Cam03g0535 731 SUPERFAMILY alpha-D-mannose-specific plant lectins 13 102 IPR036426 -
Cam03g0535 731 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 703 - -
Cam03g0535 731 CDD STKc_IRAK 423 689 - -
Cam03g0535 731 PIRSF SRK 3 731 IPR024171 GO:0004674(InterPro)
Cam03g0535 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0535 731 Gene3D Transferase(Phosphotransferase) domain 1 493 699 - -
Cam03g0535 731 Pfam S-locus glycoprotein domain 129 237 IPR000858 GO:0048544(InterPro)
Cam03g0535 731 SUPERFAMILY Protein kinase-like (PK-like) 400 709 IPR011009 -
Cam03g0535 731 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 493 696 - -
Cam03g0535 731 Pfam PAN-like domain 258 324 IPR003609 -
Cam03g0535 731 ProSiteProfiles Protein kinase domain profile. 417 695 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0535 731 SMART ntp_6 259 338 IPR003609 -
Cam03g0535 731 Pfam D-mannose binding lectin 13 97 IPR001480 -
Cam03g0535 731 Gene3D Phosphorylase Kinase; domain 1 383 492 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0535 Cam-Chr3:6207509 Cam03g0537 Cam-Chr3:6221188 0.00E+00 dispersed
Cam03g0534 Cam-Chr3:6192372 Cam03g0535 Cam-Chr3:6207509 3.40E-170 tandem
Cam03g0535 Cam-Chr3:6207509 Cam03g0536 Cam-Chr3:6214220 5.90E-139 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85041 PF07714 PK_Tyr_Ser-Thr 1.30E-50 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0535 - - - 0.0