Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0537 ATGGGAGAACTGATTTACAGGTGCAAGCTTTCGGCTTTTCTCTTTGTCTTAACGACCATAGCTCTGTTTCCAACAAAATCATACGGAAATGATAGCATAAAAACAGGGGAATCCATCAATGGAAGTACCCAGATTTTAATTTCATCTGGAGGAAACTTCGTGTTGGGAATTTTCACTCCCCAAGGCTCAAAATTTCAGTATTTGGGAATATGGTTCAACAACATCCCACAAACTATCGTGTGGGTCGCAAACAGAGACAACCCACTTGTAAATTCCTCTGGAAAATTAGAATTCAGAAGAGGAAACATCGTTCTTCTCAACGAAACAGATGGAATTTTATGGTCTTCCACTTCTCCACGATCATCGAAAGAAACAGTAGCTCAGCTGCTAGATACAGGTAATTGGGTCTTAAGAGAATCTGGGTCTGAAGATTATCTATGGCAGAGTTTCGATTACCCCTCCGATACTCTGTTACCTGGGATGAAACTGGGTTGGAACTCCAAAACCGGTCTAAACCGGAAGTTAAGATCGTGGAAAAGCTCAAACGATCCGTCGTTTGGGGACTTCACTTACAGTGTGGATCTTAGTGGGCTTCCCCAATTGGTAACTCGCAAAGGACCCATCCTAAAGTACCGGGGCGGCCCATGGTACGGTAATAGGTTTAGCGGTAGCGCTCCTCTCAGAGATACCGCAGTTTATTCTCCGAAGTTCGAGTATACAGCCGACGAAGTAACTTATTCAATCGTTGCGACGAGTAGTCTCATTGTAAAACTTGCACTGGACGCGGCTGGAATATTGCATCAAGTTTATTGGGACGATGGTAGAAAAGATTGGTATCCTCTGTATACATTGCCAGGGGATCGCTGCGACGACTATGGACTTTGCGGGAATTTTGGTATTTGTACCTTTTCCCTCACTCCACAATGCAATTGCATGGTTGGGTTTGAACCCAAATCGCCTGATGATTGGAAAAGGTTTAGATGGTCAGATGGCTGCGTTAGAAAGGACAATCAAACCTGTAGGAATGGAGAAGGGTTTAAAAGAATCCGCAGTGTGAAATTGCCAGATTCTTCAGGGTATTTGGTGAATATTAATACAAGCATTCATGACTGCGAGGCGGCGTGCTTGAACAACTGCTCTTGCTTGGCTTATGGAATAATGCAACTTTCTACAGGTGGCTATGGCTGTGTCACTTGGTTTCAGAAATTGATTGATGCTAGATTTGTTCCTGAAAATGGACAGGATATCTATGTGAGAGTGGCGGCATCTGAATTAGACTCGAGCAACAGGAAGCTTGTAATTGCTGTTAGTGTGTCTGTGGCTTCACTGATAGCCTTCTTGGTTTTAGTGGTTTGTTTCATCCTGTGGCGTAGAAGGAAAGTTAGAGGCGAAATTCAAAGTCCAGAGAATGAAGTTGAGATGCCACTCTATGATTTTACTACGATTGAGATTGCCACAAATAATTTTTCTTTTTCCAATAAGATAGGGGAAGGTGGTTTTGGTCCTGTATACAAGGGAAAGCTTCCATGTGGGCAAGAAATTGCAGTAAAAAGGTTGGCAGAGGGCTCTGGTCAAGGACAAATCGAGTTCAAAAATGAGGTTTTATTGATTTCCCAACTTCAACATCGAAATCTTGTCAAGCTGCTTGGTTTCTGCATTCATCAAGAACAAACATTACTAGTTTATGAATACATGCCAAACAAAAGTCTAGACTACTTTCTCTTTGATGATGAGGGGCGATCTTTACTCAATTGGCAAAAGAGATTGGACATCATAATTGGAATAGCTCGAGGGCTTCTTTATCTTCACAGAGATTCTAGGCTTAGAATCATACATCGGGATCTTAAAGTGAGTAATATATTATTGGATAATGAAATGAATCCAAAAATTTCAGACTTTGGAATGGCACGAATGTTTCCCGAGGACCAAACTATGACAAAAACCCAAAGAGTTGTTGGGACCTTTGGCTATATGTCTCCTGAATATGCACTCGATGGATGTTTTTCATTGAAATCAGACGTTTTTAGCTTTGGAGTTATTCTTTTGGAAATAGTAAGTGGTAAGAAGAACAGAGGCTTCTTCCATACAGATCATCAACTTAATCTTCTTGGACATGCATGGAAGCTTTGGGATGAAGGAAATGCTTTGGAATTAGTGGATGAAACATTGGAGGATCAATTCCAACCTCACGAAGCACTGCAATGCATTCAAGTTGGGCTTTTGTGTGTTCAACAGAATCCAGACGAAAGACCAACTATGTGGTCAGTACTTTCAATGTTAGAGAGTGAAAATATGTTATTATCTCCTCCTCAACAACCTGGATTTTACACCGAACGAATGGTTTCGAAGACGGATAAATCGTCGACTGAGATCTCGTCTTCCAATGAAGTGACCGTTACACTACTACAAGCTCGTTAG 2418 41.56 MGELIYRCKLSAFLFVLTTIALFPTKSYGNDSIKTGESINGSTQILISSGGNFVLGIFTPQGSKFQYLGIWFNNIPQTIVWVANRDNPLVNSSGKLEFRRGNIVLLNETDGILWSSTSPRSSKETVAQLLDTGNWVLRESGSEDYLWQSFDYPSDTLLPGMKLGWNSKTGLNRKLRSWKSSNDPSFGDFTYSVDLSGLPQLVTRKGPILKYRGGPWYGNRFSGSAPLRDTAVYSPKFEYTADEVTYSIVATSSLIVKLALDAAGILHQVYWDDGRKDWYPLYTLPGDRCDDYGLCGNFGICTFSLTPQCNCMVGFEPKSPDDWKRFRWSDGCVRKDNQTCRNGEGFKRIRSVKLPDSSGYLVNINTSIHDCEAACLNNCSCLAYGIMQLSTGGYGCVTWFQKLIDARFVPENGQDIYVRVAASELDSSNRKLVIAVSVSVASLIAFLVLVVCFILWRRRKVRGEIQSPENEVEMPLYDFTTIEIATNNFSFSNKIGEGGFGPVYKGKLPCGQEIAVKRLAEGSGQGQIEFKNEVLLISQLQHRNLVKLLGFCIHQEQTLLVYEYMPNKSLDYFLFDDEGRSLLNWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKVSNILLDNEMNPKISDFGMARMFPEDQTMTKTQRVVGTFGYMSPEYALDGCFSLKSDVFSFGVILLEIVSGKKNRGFFHTDHQLNLLGHAWKLWDEGNALELVDETLEDQFQPHEALQCIQVGLLCVQQNPDERPTMWSVLSMLESENMLLSPPQQPGFYTERMVSKTDKSSTEISSSNEVTVTLLQAR 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6221188 6224298 - CaPI482276_03g005370.1 Cam03g0537 122803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0537 805 CDD B_lectin 39 153 IPR001480 -
Cam03g0537 805 SMART serkin_6 489 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0537 805 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Cam03g0537 805 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 23 774 - -
Cam03g0537 805 Pfam Domain of unknown function (DUF3403) 762 805 IPR021820 GO:0004674(InterPro)
Cam03g0537 805 SUPERFAMILY Protein kinase-like (PK-like) 472 782 IPR011009 -
Cam03g0537 805 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Cam03g0537 805 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544(InterPro)
Cam03g0537 805 SMART blect_4 37 153 IPR001480 -
Cam03g0537 805 Pfam Protein tyrosine and serine/threonine kinase 490 759 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0537 805 ProSiteProfiles Protein kinase domain profile. 489 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0537 805 Gene3D Phosphorylase Kinase; domain 1 455 564 - -
Cam03g0537 805 Pfam D-mannose binding lectin 78 179 IPR001480 -
Cam03g0537 805 Gene3D Transferase(Phosphotransferase) domain 1 565 768 - -
Cam03g0537 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0537 805 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 768 - -
Cam03g0537 805 Gene3D - 26 150 IPR036426 -
Cam03g0537 805 Pfam PAN-like domain 340 405 IPR003609 -
Cam03g0537 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 184 IPR036426 -
Cam03g0537 805 SMART ntp_6 341 420 IPR003609 -
Cam03g0537 805 CDD PAN_AP_plant 337 421 - -
Cam03g0537 805 PIRSF SRK 3 805 IPR024171 GO:0004674(InterPro)
Cam03g0537 805 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 456 564 - -
Cam03g0537 805 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Cam03g0537 805 CDD STKc_IRAK 495 761 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0533 Cam-Chr3:6181029 Cam03g0537 Cam-Chr3:6221188 1.80E-192 dispersed
Cam03g0534 Cam-Chr3:6192372 Cam03g0537 Cam-Chr3:6221188 1.10E-189 dispersed
Cam03g0535 Cam-Chr3:6207509 Cam03g0537 Cam-Chr3:6221188 0.00E+00 dispersed
Cam03g0537 Cam-Chr3:6221188 Cam05g1677 Cam-Chr5:24956488 1.60E-214 dispersed
Cam10g2113 Cam-Chr10:34747711 Cam03g0537 Cam-Chr3:6221188 2.80E-26 dispersed
Cam03g0536 Cam-Chr3:6214220 Cam03g0537 Cam-Chr3:6221188 2.50E-182 tandem
Cam03g0537 Cam-Chr3:6221188 Cam03g0538 Cam-Chr3:6229228 8.10E-259 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85042 PF07714 PK_Tyr_Ser-Thr 3.30E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0537 - - - 0.0