Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0543 ATGAAACCTAAAAACAACTACGCCTCTTCATATCCTACTCCACTTCTTCTTCTTCTTTCATTTACTTTCTTCTCTCCAACATTTTGCTTTGGCAAAGATTCAATCACATCAGAAAATTTCATCAAAGACCCTGCTTCTGTTACTTCCAATGCCAGTTCCTTCCAGTTGGGCTTCTTCACACCTCCTAATTCCACCGCCCGATATGTCGGAATTTGGTACAACCAAATTTCCTTACAAACCATAGTCTGGGTGGCCAACAAAGACAATCCCCTCAAAGATTCTTCTGGGATTTTCACTATTTCTAAACAGGGACATCTCGTCGTCTTAGATGGAAACCACACCGTCCTCTGGTCTTCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAACCAACACAATCGCTCGAATTTTAGATTCAGGTAACCTTGTTTTGGAAGATACCGCTTCTGGGAACATCATATGGGAGAGTTTTCAACACCCTTCTAATAAATTCTTGACTTCCATGAAACTGATCACGAACACAAGAACAAAAGAGAAGATGCAGCTTACCTCATGGAGCACCCCAGTTAATCCATCCACTGGAAACTTTTCCTTAGCACTAGAAGTTCTGACTATTCCTGAAGCTGTGATTTGGTCTAATGGTGGAAACCTTTATTGGCGATCTGGTCCATGGAACGGTCAGTCTTTTATCGGAATACCCGAAATGAACGCTGTTTATCTTTCTGGGTTTAACCTTGTAATTCAAGATCAAGAATACACTTTATCTGTTCCTTATAATTACACTATTCAAGAATTCGCTTATTTGTTTTTAACTTCGAGAGGGAATTTGGTGCAAACGTATTGGAATCCTCAAGTGAAGAATTGGGATGTTACTTGGTTTGCTATAAAAACAGAGTGTGATTTCTATGGAACTTGTGGGGCGTTTGGGATTTGTAATCCAAAGGCATCTCCTAATTGCAGTTGTTTAAAAGGGTTTAAGCCAAAGAATGAAGAGGAATGGAATCAAGGAAATTGGAGTGGTGGGTGTGTGAGAAGGACGCCATTGCAATGCATTAATGGCAGTTCTGAAGAAGATGGATTTCTAACAGTTGAAATGGTTAAATTGCCATATTTTGTAGAGTGGTCCATTTTCGCCGTTACAGAAGATAATTGCAAACAAGAGTGCTTGAGCAATTGTTCGTGTAATGCTTATGCATTTGAAAATGGTATTCGGTGTATGCTATGGAGAAGGGATGACTTAATTGATATACAAAAATTTGAGACTGGTGGGGCTTCTCTTTACCTTCGGTTGCCATATGCAGAATTAGATCATAATAATAATGTAAAAGATAAGAAAGGGATTATTATAGCAATTGTGCTACCAGTGACCTTTATCATCATGATCACCATCACCATATCATTTTGGTTGAAAAGGAAGACTCACAAAAAGAAAAAAACATCTGAAGAAATAGAAAGGACTTTGAAATTGACAAGGGAGGATGATATGATTGAGGATGGTATCAAACTTGAAGATCTACCTCTTTATGACTTTGAGCAGCTTGTAATTGCAACAAACAATTTTGATATAAATAACAAACTTGGGCAAGGTGGGTTTGGTCCTGTATATAAGGGAAAATTGTTAAATGGACAAGAAATAGCAGTAAAAAGGCTTTCAAGAGCCTCCAATCAAGGGCATGAAGAATTTATAAATGAAGTGAGAGTGATTTCTAAACTACAACATAGAAATCTTGTAAGGCTCTTTGGTTGTTGCATGGAAGGAGAAGAGAAAATGTTGATATATGAGTACATGCCTCGCCTAAGTTTGGATGCTTTAATCTTTGGCTCTCCCCAATCAGAACTTTTGGACTGGAGGCAAAGATTTAATATTATTGATGGAATTGCTCGAGGTCTTCTTTATCTTCATAGAGACTCAAGATTGAAAATCATTCATAGAGATCTCAAAGCAAGTAATATTTTGTTAGACCAAGATTTGAACCCTAAAATTTCTGACTTTGGCATGGCAAGGATTTTTTGTGGCAATGAAGTCCAAGCAAACACTTTAAGAGTTGTCGGAACTTATGGGTATATGTCTCCTGAATATGCAATGCAAGGTCGATTTTCAGAGAAATCAGATGTATTTAGTTTTGGAGTTCTATTGCTTGAAATTATCAGTGGGAGACGAAATACAGAGTTTTACTACCATGAACAAGCTATAAGCTTATTGGGATTTGTATGGAAGTTGTGGATGGAAGACAATCTTATTCCTACAATCGAACCAAGAATATATGAATTGTGCTATCAACTAGAGATTTTTAGATGCATTCAAGTGGGGCTCTTATGCGTTCAAGAATTTGCAAATTTTAGGCCAAATGTTTCCACTATTATTTCAATGCTCAATAGTGAAATTGTAGATCTTCCTTCTCCAAAGGAACCTGGGTTTGTTGGTAGACCACATGAAAGCCACACAAAGTCATCTCAACAAAGTTCAAATAAATATTCTGTAAATAATGTTACCCTCACCACAGTCATAGCTCGATAG 2523 37.38 MKPKNNYASSYPTPLLLLLSFTFFSPTFCFGKDSITSENFIKDPASVTSNASSFQLGFFTPPNSTARYVGIWYNQISLQTIVWVANKDNPLKDSSGIFTISKQGHLVVLDGNHTVLWSSNVSSSSSSSSSSTNTIARILDSGNLVLEDTASGNIIWESFQHPSNKFLTSMKLITNTRTKEKMQLTSWSTPVNPSTGNFSLALEVLTIPEAVIWSNGGNLYWRSGPWNGQSFIGIPEMNAVYLSGFNLVIQDQEYTLSVPYNYTIQEFAYLFLTSRGNLVQTYWNPQVKNWDVTWFAIKTECDFYGTCGAFGICNPKASPNCSCLKGFKPKNEEEWNQGNWSGGCVRRTPLQCINGSSEEDGFLTVEMVKLPYFVEWSIFAVTEDNCKQECLSNCSCNAYAFENGIRCMLWRRDDLIDIQKFETGGASLYLRLPYAELDHNNNVKDKKGIIIAIVLPVTFIIMITITISFWLKRKTHKKKKTSEEIERTLKLTREDDMIEDGIKLEDLPLYDFEQLVIATNNFDINNKLGQGGFGPVYKGKLLNGQEIAVKRLSRASNQGHEEFINEVRVISKLQHRNLVRLFGCCMEGEEKMLIYEYMPRLSLDALIFGSPQSELLDWRQRFNIIDGIARGLLYLHRDSRLKIIHRDLKASNILLDQDLNPKISDFGMARIFCGNEVQANTLRVVGTYGYMSPEYAMQGRFSEKSDVFSFGVLLLEIISGRRNTEFYYHEQAISLLGFVWKLWMEDNLIPTIEPRIYELCYQLEIFRCIQVGLLCVQEFANFRPNVSTIISMLNSEIVDLPSPKEPGFVGRPHESHTKSSQQSSNKYSVNNVTLTTVIAR 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6286489 6289668 + CaPI482276_03g005430.1 Cam03g0543 122809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0543 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 486 597 - -
Cam03g0543 840 Pfam D-mannose binding lectin 80 187 IPR001480 -
Cam03g0543 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 159 - -
Cam03g0543 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
Cam03g0543 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 227 IPR036426 -
Cam03g0543 840 CDD STKc_IRAK 528 794 - -
Cam03g0543 840 SMART serkin_6 522 780 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0543 840 Gene3D Transferase(Phosphotransferase) domain 1 598 800 - -
Cam03g0543 840 ProSiteProfiles PAN/Apple domain profile. 352 433 IPR003609 -
Cam03g0543 840 SMART ntp_6 357 432 IPR003609 -
Cam03g0543 840 Pfam Domain of unknown function (DUF3403) 795 840 IPR021820 GO:0004674(InterPro)
Cam03g0543 840 PIRSF SRK 5 840 IPR024171 GO:0004674(InterPro)
Cam03g0543 840 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 807 - -
Cam03g0543 840 SUPERFAMILY Protein kinase-like (PK-like) 505 793 IPR011009 -
Cam03g0543 840 ProSiteProfiles Bulb-type lectin domain profile. 32 159 IPR001480 -
Cam03g0543 840 Pfam Protein tyrosine and serine/threonine kinase 524 728 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0543 840 Gene3D - 30 160 IPR036426 -
Cam03g0543 840 CDD PAN_AP_plant 348 433 - -
Cam03g0543 840 ProSiteProfiles Protein kinase domain profile. 522 840 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0543 840 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544(InterPro)
Cam03g0543 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0543 840 Pfam PAN-like domain 352 417 IPR003609 -
Cam03g0543 840 CDD B_lectin 39 162 IPR001480 -
Cam03g0543 840 SMART blect_4 38 162 IPR001480 -
Cam03g0543 840 Gene3D Phosphorylase Kinase; domain 1 481 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0541 Cam-Chr3:6249612 Cam03g0543 Cam-Chr3:6286489 1.80E-293 dispersed
Cam03g0543 Cam-Chr3:6286489 Cam10g0584 Cam-Chr10:8981569 5.60E-178 dispersed
Cam03g0542 Cam-Chr3:6274398 Cam03g0543 Cam-Chr3:6286489 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85047 PF07714 PK_Tyr_Ser-Thr 2.20E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0543 - - - 0.0