Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0596 ATGAGAGGGGAAAGTGGGGCTTTGGCCAACCGAGTCGGTGAGAACACGCAAAGAGCTACCAGACGACCTGGCGATGGATTTTTACTTACTGGTCGAATGGGTATTGATTTTCGTTCTGCAGGAGAAGTTTACAGAATTACGGCCCCAAGTATGAGTTGCATCTGCTTCGGTTCCTCTACTGTGGAGAAGAAACGAATCTCTACACGTGCTGATAAGGAATTGGACATTGACTTGCTTGAGAATGTAAAACAAATCTCCTTCAATGAATTAAGATCTGCTTCGGACGATTTCCATTCAAACAATAGAATTGGACGAGGAGGTTTTGGAACTGTTTACAAGGGCACATTAAGGAATGGAGTACAAGTTGCAATAAAGAAGCTCTCCATAGAGTCTAAGCAAGGTGCTCACGAATTTTTGACAGAGATCAAAACCATTTCAAATGTTAGGCATCGAAACCTTGTCGAGTTGATTGGATGCTGTTCTCAAAAAGCTAACCGGATCTTGGTATATGAATATCTGGAGAATAATAGTCTCGACCATGCTTTGTTAGATCCTAAGAAAACAAGCGTGAACCTAGATTGGGGGAAGAGGTCCTCTATTTGCATTGGTACTGCGAGGGGTCTTCAATTTCTTCACGAGGAAGCTGTTCCACGTATTGTGCATAGAGACATCAAGGCTAGTAATATACTCCTTGATGGGGACTTCAATCCGAAAATTGGTGACTTTGGATTAGCCAAACTTTTCCCAGATGATATCACTCACATTAGCACAAGAATTGCAGGAACAACCGGTTATTTGGCTCCAGAGTATGCATTGGGAGGTCAGCTAACTCCAAAGGCTGATGTGTATAGCTTCGGAGTCCTCATCCTTGAAATAGTTAGTGGTAGACGTAGCAGTACAGTTTTTGGGAGAGAAATATCAATACTCTTGCTGGAAAGGGTGTGGGAGCTATATGAAGAAGGAAAACTCTTAGAAATAGTTGATCCTAGACTAGAAGATTATCCTCAGGAAGAAGTGCTTAGGTACATGAAAGTGGCTCTTTTTTGCACACAAGCGGCTGCAAATCGGCGGCCAGCAATGAGCCAAGTCGTTGACATGCTTACAAAGAATATCAAGCTTAACGAGAAGTTACTTACCGCCCCGGGGTTCTATGGAGGCCTGGGGCTTAGTGACATTCCTTCAGTGAGCAAGAAGACCTCGAACACTTCCACTAGCAACGAGATGAGCTCCGCCGTCATCTCCATAACTCAAATCACCCCCAGATGA 1266 43.84 MRGESGALANRVGENTQRATRRPGDGFLLTGRMGIDFRSAGEVYRITAPSMSCICFGSSTVEKKRISTRADKELDIDLLENVKQISFNELRSASDDFHSNNRIGRGGFGTVYKGTLRNGVQVAIKKLSIESKQGAHEFLTEIKTISNVRHRNLVELIGCCSQKANRILVYEYLENNSLDHALLDPKKTSVNLDWGKRSSICIGTARGLQFLHEEAVPRIVHRDIKASNILLDGDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTPKADVYSFGVLILEIVSGRRSSTVFGREISILLLERVWELYEEGKLLEIVDPRLEDYPQEEVLRYMKVALFCTQAAANRRPAMSQVVDMLTKNIKLNEKLLTAPGFYGGLGLSDIPSVSKKTSNTSTSNEMSSAVISITQITPR 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6803201 6815134 - CaPI482276_03g005960.1 Cam03g0596 122862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0596 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0596 421 ProSiteProfiles Protein kinase domain profile. 97 373 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0596 421 MobiDBLite consensus disorder prediction 395 421 - -
Cam03g0596 421 Pfam Protein tyrosine and serine/threonine kinase 99 367 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0596 421 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524(InterPro)
Cam03g0596 421 SMART serkin_6 97 383 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0596 421 FunFam cold-responsive protein kinase 1 68 172 - -
Cam03g0596 421 Gene3D Phosphorylase Kinase; domain 1 64 172 - -
Cam03g0596 421 Gene3D Transferase(Phosphotransferase) domain 1 173 379 - -
Cam03g0596 421 CDD STKc_IRAK 103 369 - -
Cam03g0596 421 MobiDBLite consensus disorder prediction 1 25 - -
Cam03g0596 421 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 65 406 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam03g0596 421 SUPERFAMILY Protein kinase-like (PK-like) 79 367 IPR011009 -
Cam03g0596 421 FunFam Putative LRR receptor-like serine/threonine-protein kinase 173 379 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0596 Cam-Chr3:6803201 Cam10g2162 Cam-Chr10:35118581 4.90E-114 dispersed
Cam03g0596 Cam-Chr3:6803201 Cam07g1057 Cam-Chr7:24920524 2.70E-88 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85048 PF00069 Pkinase 1.00E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0596 - - - 0.0