Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0618 ATGGATGAAGATGCTAATTCTTGGTTAAGAAGAACCAAGTTTTCTCACACAATATGTTATCGTTTAGAGTCCTTACGATTGGCTTCCTTTCCTGTGGTCACTCAGCCACCACTCAAATCAGTCGCACAATCAAGATCAACCCTTCCTAATAACCTAACCAAGCAGAGGTCTTTATCTCCTCCTCCACAAACTACACTCTCCGGCGCATTTAAGGATGCACGTACCGATCAAAAACGATTTTCAACTCCACAGCCTCAGAGGAAAGAACCTGTAAAAGAAAAGGGTAAAAGGCTATTTAGTAAAAAAGCTAAGGTGCAAAATTCCCTGAAGGAAGAGAAGTTAAAAGGACCTTTGAGGCATCTTATATCTTTTAAAGGCAGTGATAAGTTCAAATTCAAGGAGTCTTCTTGGACTAAGTTTGGCGGAGGGAAGGTCACTGCTGTTGAAGCTGAAGACGAATCGTCTATTGACCTGTCTAAGTTGATGTTTGGACATAGATTTGCTTTTGGAGCTCATAGTCGGCTATACCATGGAATTTATGAAGATAAAGTTGTTGCTGCTAAGATGATCAATCTACCAGTCAATGACGAAAATGGCGATCTCGCAGCTCGCTTAATAAAGCAATTTGGTAGGGAAGTAACCCTTTTGTCTCGTCTCCATCATCGCAATGTTATAAAGTTAGTAGCAGCAGTGAAAAAGCCACCCGTTTATTGCATCATCACTGAGTATCTACCTCAGGGTTCCTTGAGGGCATATCTTCACAAACTTGAAAAAAAATCTCTCCCATTGCAAAAACAAATTGCCATTGCCTTAGACATTGCTCGTGGGATGGAATACATTCACTCGCAAGGCGTCATTCATCGGGATCTCAAACCTGAGAACATTCTTATTGATCAAGACTTTTGTCTAAAGATTGCCGATTTTGGCATTGCTTGTGAGGAGGCACATTGTGATACACTGGCCGAGGACCCGGGAACTTTTCGTTGGATGGCCCCCGAGATGATCAAACGGAAACCTTACGGGAGAAAGGTCGATATCTACAGCTTCGGACTTCTCCTATGGGAATTGGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCAATCCAAGCAGCTTTTGCAGTTGTAGATAAGAATATTAGACCGGTCATCCCGGGGGAGTGTCCTCCAGTGATGCAGATGTTAATCGAGCAATGTTGGTGCGAGAAACCGGAGAAGAGGCCGGAGTTTTGGCAGGTGGTGAAAGTGTTAGAGCAACTTGAGAGTTGTGTTGGGGAAGATGGTACATTGATGACGAATGTAGAGGTAGAGTTAGAGGGGAAGCCAAGTTGGGAAGATCACAAGAAAGGTTTAAAGCATTGGATACAGAAGTTTGGTCCTCTTCATTCTCATACTTCTCTCACCTCCAAATCTAAATTCATATGA 1425 42.81 MDEDANSWLRRTKFSHTICYRLESLRLASFPVVTQPPLKSVAQSRSTLPNNLTKQRSLSPPPQTTLSGAFKDARTDQKRFSTPQPQRKEPVKEKGKRLFSKKAKVQNSLKEEKLKGPLRHLISFKGSDKFKFKESSWTKFGGGKVTAVEAEDESSIDLSKLMFGHRFAFGAHSRLYHGIYEDKVVAAKMINLPVNDENGDLAARLIKQFGREVTLLSRLHHRNVIKLVAAVKKPPVYCIITEYLPQGSLRAYLHKLEKKSLPLQKQIAIALDIARGMEYIHSQGVIHRDLKPENILIDQDFCLKIADFGIACEEAHCDTLAEDPGTFRWMAPEMIKRKPYGRKVDIYSFGLLLWELVAGKIPYEDMTPIQAAFAVVDKNIRPVIPGECPPVMQMLIEQCWCEKPEKRPEFWQVVKVLEQLESCVGEDGTLMTNVEVELEGKPSWEDHKKGLKHWIQKFGPLHSHTSLTSKSKFI 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7039496 7041236 - CaPI482276_03g006180.1 Cam03g0618 122884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0618 474 MobiDBLite consensus disorder prediction 39 100 - -
Cam03g0618 474 ProSiteProfiles Protein kinase domain profile. 161 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 FunFam serine/threonine-protein kinase HT1 246 437 - -
Cam03g0618 474 MobiDBLite consensus disorder prediction 72 96 - -
Cam03g0618 474 MobiDBLite consensus disorder prediction 39 71 - -
Cam03g0618 474 SUPERFAMILY Protein kinase-like (PK-like) 153 417 IPR011009 -
Cam03g0618 474 Gene3D Phosphorylase Kinase; domain 1 150 244 - -
Cam03g0618 474 Pfam Protein tyrosine and serine/threonine kinase 166 417 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 PANTHER SERINE-THREONINE PROTEIN KINASE 59 420 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cam03g0618 474 SMART serkin_6 161 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0618 474 CDD STKc_MAP3K-like 168 417 - -
Cam03g0618 474 Gene3D Transferase(Phosphotransferase) domain 1 245 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0618 Cam-Chr3:7039496 Cam11g1142 Cam-Chr11:22404977 8.10E-73 dispersed
Cam05g1730 Cam-Chr5:25840596 Cam03g0618 Cam-Chr3:7039496 2.30E-35 transposed
Cam01g2365 Cam-Chr1:35676938 Cam03g0618 Cam-Chr3:7039496 6.20E-167 wgd
Cam03g0618 Cam-Chr3:7039496 Cam05g2484 Cam-Chr5:32685211 5.50E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85050 PF07714 PK_Tyr_Ser-Thr 2.40E-59 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0618 - - - 0.0