Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0640 ATGCTTCTCCACCCATTCTTACTCTTCTTCTTCTTCTTCTTCTTCATCTTCCTCTCAAACCCTTCTCTTCTCTCCTTCTCTCTAACCCAAGAAGGCCTCTATCTCCACTCCATCAAGCTCTCTCTCGACGACCCAGATTCCTCTCTCCGCTCATGGAACGACCGCGACGACACTCCTTGTTCCTGGTTCGGCGTTGCTTGCGACCCTCAAACCAACTCCGTTCACTCTCTCGACCTCTCTAACACCAACATCGCCGGCCCATTTCCTTCCCTCCTTTGCCGTCTCCAGAATCTCTCATTCCTCTCCCTTTACAACAATTCCATCAACATGTCCCTTCCCTCTGTTATTTCCGACTGTACCAGTCTCCTCCATCTCGACCTCTCTCAGAATCTCCTCACCGGCGCGCTTCCTAGCTCGATTGCCGATCTCCCCAACCTTCAGTACTTGGATTTGACAGGGAATAACTTCTCCGGCGACATTCCGGAGAGTTTCGCTCGGTTTCGGAACTTGGAAGTTCTGTCGCTTGTTTATAATCTTCTCGATGGGCCGATGCCGGCGTTTCTCGGCAACATTACGTCATTGAAGATGTTGAACCTGTCTTATAACCCGTTTGTGCCGAGCCGGATCCCGCCGGAGTTCGGGAATTTGACGAATCTTGAGGTGCTCTGGTTGACTCAGTGTAATTTGGTTGGGGAAATTCCGCAGTCTCTTGGTCGGTTGAAGCGGCTTACCGATTTGGACTTGGCGTTGAATAATCTTGAAGGTCCGATTCCGAAGTCGCTCACGGAGTTGAGTAGCGTGGTTCAGATTGAGTTGTATAATAACTCGTTAACTGGTGAGTTGCCTTCTGAGTTTTCGAATCTGACTTCATTGCGACTGTTTGACGCTTCGATGAATGGTTTGACTGGGGCGATTCCGGATGAGTTGTGTCAATTGCCGCTTGAGAGTCTCAATCTCTACGAGAACAAGTTTGAAGGGAAATTACCGGAAAGCATTGCCAACTCGCGGGGTTTGTACGAACTCAGACTGTTCAGTAACCAGCTCACTGGCGAGTTACCGCGAAATCTTGGAAAGAACTCGCCGTTGAGATGGATGGATGTTTCCAACAACCAGTTTACGGGTGAAATCCCGGGGAATTTGTGTGAGAAGGGAGAGTTGGAGGAACTTCTGATGATCAACAACCAGTTTTCCGGCGAGATTCCGGCAAGTTTAGGTTCGTGCCAGAGTCTTACGAGGGTACGATTGGGTTATAATCTATTATCCGGCGAGGTACCGGCGGGATTTTGGGGCCTCCCACATGTGTATCTGTTGGAGCTGGTGAGTAACTCGTTTTCTGGGAAGATTTCGGATGCCATTGCCACTGCTAAGAACCTTTCGATTTTCATTATCTCTAAGAACAACTTCACCGGCACATTACCGACGGAGATGGGACGGCTGGAAAATCTTGTGAAGTTGCTAGCGACGGATAACAAACTAACTGGGTCACTACCAGGGAGTCTTGTGAATCTTAGGCATCTTTCGAGTTTAGATCTTCGGAATAATGAACTCTCTGGGGAACTTCCCAGTGGAATCAAATCGTGGAAGAATCTCAACGAACTCAATTTAGCAAACAATGAATTCACCGGTGAAATCCCCGAAGAAATCGGAAACTTGCCTGTTCTAAATTACCTTGATCTGTCTGGAAATCTGTTTTCTGGGGATGTCCCTCTTGGGTTACAGAATTTGAAGCTCAATCTACTCAATTTATCTAACAATCACTTGTCAGGTGAGCTTCCTCCATTTTTAGCTAAGGAAATCTACAGAAACAGCTTTTTGGGGAATCCAGAGTTGTGTGGACATTTCGAAAGTTTGTGCAACAGCAAAGGTGAAGCTAAAAGCCAAGGCTCTCTCTGGTTGCTGCGTTCAATCTTCATCCTTGCCGGTATCGTGTTTATCATTGGTGTCATCTGGTTTTACCTCAAGTACAGGAAGTTTAAGATGGCAAAAAAAGAAATGGAGAAGAGCAAATGGACATTAATGTCCTTCCACAAGTTGGATTTCAGTGAATATGAGATCTTGGAATCCCTTGATGAAGATAACATCATAGGCAGTGGATCTTCTGGTAAAGTTTACAAAGTTGTGCTCAACAATGGTGAGGCTGTTGCAGTGAAGAAACTGTTTGGAGGGATGAGGAAAGACAGCGAAAAAGGCGATATCGAGAAGGGTCAAGTTCAAGACAATGCCTTCGAAGCCGAAATCGACACTCTGGGAAAGATTAGGCACAAAAACATTGTGAAGTTATGGTGCTGCTGTGTTACAAGAGACTACAAGCTTTTAGTCTATGAATATATGCCTAATGGAAGCTTGGGAGATTTGCTTCATAGTAGTAAAAAAGGATTGCTTGATTGGCCTACTAGGTTTAAGATAGCTTTAGATGCTGCAGAAGGACTTTCTTATCTTCACCACGATTGCGTCCCTCCAATCGTTCATCGCGACGTTAAGTCAAACAACATCTTGTTGGATGGCGATTTCGGAGCACGGTTAGCAGATTTCGGTGTAGCTAAAGTCATTGATTCAACCGGGAAAGGGCCTAAATCCATGTCGGTAATTGCAGGATCTTGCGGTTACATTGCGCCTGAGTATGCTTACACACTCCGAGTGAATGAAAAAAGCGATATATACAGTTTCGGCGTGGTGATTCTCGAGCTAATAACTGGGAGGCTCCCGGTCGATCCGGAGTTTGGAGAGAAGGACCTAGTGAAATGGGTGTGTTTCACATTGGATCAAGACGGGATCGATCAAGTGATCGACGGGAAACTGGATAGCTGTTTCAAGGAGGAAATATGCAGAGTCCTTAACATTGGGTTGCTTTGCACTAGCCCACTTCCCATCAACCGGCCATCAATGAGAAAAGTGGTGAAAATGCTGCAAGAAGTTGGGGCAGAGAACCAATTGAAAAGCAACAACAAAGATGGAAAGTTAACTCCTTACTATTATGAAGATGCATCAGATCAGGGAAGTGTAGCTTAG 3009 46.0 MLLHPFLLFFFFFFFIFLSNPSLLSFSLTQEGLYLHSIKLSLDDPDSSLRSWNDRDDTPCSWFGVACDPQTNSVHSLDLSNTNIAGPFPSLLCRLQNLSFLSLYNNSINMSLPSVISDCTSLLHLDLSQNLLTGALPSSIADLPNLQYLDLTGNNFSGDIPESFARFRNLEVLSLVYNLLDGPMPAFLGNITSLKMLNLSYNPFVPSRIPPEFGNLTNLEVLWLTQCNLVGEIPQSLGRLKRLTDLDLALNNLEGPIPKSLTELSSVVQIELYNNSLTGELPSEFSNLTSLRLFDASMNGLTGAIPDELCQLPLESLNLYENKFEGKLPESIANSRGLYELRLFSNQLTGELPRNLGKNSPLRWMDVSNNQFTGEIPGNLCEKGELEELLMINNQFSGEIPASLGSCQSLTRVRLGYNLLSGEVPAGFWGLPHVYLLELVSNSFSGKISDAIATAKNLSIFIISKNNFTGTLPTEMGRLENLVKLLATDNKLTGSLPGSLVNLRHLSSLDLRNNELSGELPSGIKSWKNLNELNLANNEFTGEIPEEIGNLPVLNYLDLSGNLFSGDVPLGLQNLKLNLLNLSNNHLSGELPPFLAKEIYRNSFLGNPELCGHFESLCNSKGEAKSQGSLWLLRSIFILAGIVFIIGVIWFYLKYRKFKMAKKEMEKSKWTLMSFHKLDFSEYEILESLDEDNIIGSGSSGKVYKVVLNNGEAVAVKKLFGGMRKDSEKGDIEKGQVQDNAFEAEIDTLGKIRHKNIVKLWCCCVTRDYKLLVYEYMPNGSLGDLLHSSKKGLLDWPTRFKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARLADFGVAKVIDSTGKGPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELITGRLPVDPEFGEKDLVKWVCFTLDQDGIDQVIDGKLDSCFKEEICRVLNIGLLCTSPLPINRPSMRKVVKMLQEVGAENQLKSNNKDGKLTPYYYEDASDQGSVA 1002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7257531 7260641 + CaPI482276_03g006400.1 Cam03g0640 122906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0640 1002 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524(InterPro)
Cam03g0640 1002 Gene3D Phosphorylase Kinase; domain 1 653 776 - -
Cam03g0640 1002 ProSiteProfiles Protein kinase domain profile. 689 972 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0640 1002 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Cam03g0640 1002 Pfam Protein kinase domain 692 907 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0640 1002 SUPERFAMILY Protein kinase-like (PK-like) 680 969 IPR011009 -
Cam03g0640 1002 FunFam Receptor-like protein kinase HSL1 673 776 - -
Cam03g0640 1002 SUPERFAMILY RNI-like 271 603 - -
Cam03g0640 1002 SUPERFAMILY L domain-like 36 377 - -
Cam03g0640 1002 FunFam Leucine-rich receptor-like protein kinase family protein 209 307 - -
Cam03g0640 1002 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 28 191 - -
Cam03g0640 1002 Gene3D Ribonuclease Inhibitor 336 621 IPR032675 -
Cam03g0640 1002 FunFam Receptor-like protein kinase HSL1 313 620 - -
Cam03g0640 1002 Gene3D Transferase(Phosphotransferase) domain 1 777 996 - -
Cam03g0640 1002 PANTHER RECEPTOR-LIKE PROTEIN 55 34 185 - -
Cam03g0640 1002 SMART LRR_typ_2 216 240 IPR003591 -
Cam03g0640 1002 SMART LRR_typ_2 95 119 IPR003591 -
Cam03g0640 1002 SMART LRR_typ_2 288 312 IPR003591 -
Cam03g0640 1002 SMART LRR_typ_2 143 166 IPR003591 -
Cam03g0640 1002 SMART LRR_typ_2 503 526 IPR003591 -
Cam03g0640 1002 SMART LRR_typ_2 191 215 IPR003591 -
Cam03g0640 1002 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Cam03g0640 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 777 986 - -
Cam03g0640 1002 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Gene3D Ribonuclease Inhibitor 193 264 IPR032675 -
Cam03g0640 1002 Gene3D Ribonuclease Inhibitor 265 335 IPR032675 -
Cam03g0640 1002 SMART serkin_6 689 955 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 554 575 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 386 407 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 314 334 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 218 240 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 362 381 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 269 288 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 529 551 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 577 596 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 Pfam Leucine Rich Repeat 505 526 IPR001611 GO:0005515(InterPro)
Cam03g0640 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0640 Cam-Chr3:7257531 Cam10g0790 Cam-Chr10:15046422 2.60E-89 dispersed
Cam11g1529 Cam-Chr11:28126512 Cam03g0640 Cam-Chr3:7257531 2.20E-24 dispersed
Cam02g0250 Cam-Chr2:3377187 Cam03g0640 Cam-Chr3:7257531 8.90E-167 transposed
Cam03g1627 Cam-Chr3:31276344 Cam03g0640 Cam-Chr3:7257531 2.60E-73 transposed
Cam01g2390 Cam-Chr1:35856006 Cam03g0640 Cam-Chr3:7257531 8.00E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85051 PF00069 Pkinase 1.80E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0640 - - - 0.0