Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0662 ATGGTGATGGGAGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAAAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTCCCCGTCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGGACCTTCGCTGGCTTGCCGGAAAATTGTGTCTTTGATTCTTCAGGGATCGTTGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACCGCCACACAAGGCGGTTTTCGACAAATTTTACCGGTAAAGCGGCGGAGGGATTGCCAAGATGGCCAAACTTGTTGA 546 47.07 MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7479364 7479909 - CaPI482276_03g006620.1 Cam03g0662 122928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0662 181 PANTHER CYCLIC DOF FACTOR 2 32 117 IPR045174 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0006355(InterPro)
Cam03g0662 181 Pfam Dof domain, zinc finger 61 116 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam03g0662 181 MobiDBLite consensus disorder prediction 35 49 - -
Cam03g0662 181 Coils Coil 23 55 - -
Cam03g0662 181 ProSiteProfiles Zinc finger Dof-type profile. 63 117 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam03g0662 181 ProSitePatterns Zinc finger Dof-type signature. 65 101 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam03g0662 181 MobiDBLite consensus disorder prediction 29 58 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0662 Cam-Chr3:7479364 Cam10g1567 Cam-Chr10:29386794 2.90E-31 dispersed
Cam01g2430 Cam-Chr1:36157653 Cam03g0662 Cam-Chr3:7479364 9.00E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51656 PF02701 zf-Dof 6.40E-32 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0662 - - - 0.0