Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam03g0662 | ATGGTGATGGGAGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAAAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTCCCCGTCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGGACCTTCGCTGGCTTGCCGGAAAATTGTGTCTTTGATTCTTCAGGGATCGTTGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACCGCCACACAAGGCGGTTTTCGACAAATTTTACCGGTAAAGCGGCGGAGGGATTGCCAAGATGGCCAAACTTGTTGA | 546 | 47.07 | MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC | 181 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7479364 | 7479909 | - | CaPI482276_03g006620.1 | Cam03g0662 | 122928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam03g0662 | 181 | PANTHER | CYCLIC DOF FACTOR 2 | 32 | 117 | IPR045174 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0006355(InterPro) | |
Cam03g0662 | 181 | Pfam | Dof domain, zinc finger | 61 | 116 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cam03g0662 | 181 | MobiDBLite | consensus disorder prediction | 35 | 49 | - | - | |
Cam03g0662 | 181 | Coils | Coil | 23 | 55 | - | - | |
Cam03g0662 | 181 | ProSiteProfiles | Zinc finger Dof-type profile. | 63 | 117 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cam03g0662 | 181 | ProSitePatterns | Zinc finger Dof-type signature. | 65 | 101 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cam03g0662 | 181 | MobiDBLite | consensus disorder prediction | 29 | 58 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g0662 | Cam-Chr3:7479364 | Cam10g1567 | Cam-Chr10:29386794 | 2.90E-31 | dispersed | |
Cam01g2430 | Cam-Chr1:36157653 | Cam03g0662 | Cam-Chr3:7479364 | 9.00E-43 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51656 | PF02701 | zf-Dof | 6.40E-32 | No_clan | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam03g0662 | - | - | - | 0.0 |