Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0673 ATGGAGAAAAAGGGTACCATTTTAATGCAAAGGTACGAGCTTGGGAGAATGCTTGGACAAGGCACTTTTGCTAAAGTCTACCATGCTCGTAATCTCAACTCTGGCCAGAGCGTCGCCATTAAAATCATTGACAAAGAGAAAGTGTTACGTGTTGGGTTGATCGACCAAATCAAGAGGGAAATCTCTGTTATGCGCCTTGTCCGACATCCCAATGTGGTGCAGCTTTATGAGGTTATGGCTAGCAGGACCAAAATCTATTTTGCTATGGAGTATGTTAAAGGAGGGGAGCTTTTTAATAAAGTGGCTAAAGGGAAGCTTAAAGAAGATGCTGCTCGTAAGTACTTTCAACAGCTAATTGGTGCTGTTGATTATTGTCATAGCCGTGGTGTGTACCATAGAGATATCAAGCCTGAAAATCTCCTTCTTGATGAGTTTGGGAATCTCAAGATTTCTGATTTTGGGTTAAGTGCTTTGGCCGAGTCTAGAAGACAAGATGGGCTTCTTCATACAACTTGTGGTACTCCTGCTTATGTTGCCCCTGAAGTCATCAACAAGAAAGGTTTGAATTTTGATTGCTTTGTTTATTTTGCATTGAGATTATTGACTTTGAAATCATTGATTTGTATATGGTACGAGATATTGATGAATTTGCATTGGCAATTACTTGTTAAAAAAGGTTATGATGGTGCTAAAGCTGATATTTGGTCATCTGGGGTTGTTCTGTTTGTTCTTCTGGCTGGTTATCTCCCTTTCCATGATCCAAATCTAATGGAAATGTACAGAAAAATCTCAAGAGGAGAATTCAGATGCCCTCATTGGTTTCCCCCAGAAGTTCGAAAACTACTCTCAAGAATCCTTGACCCATATCCTCACACTAGAATAAACATGGCCAAACTCATGGAAAATTCCTGGTTCAAGAAGGGTTTCAAAACAAATGTAGCAACTCCAAAACAACTTCAAATCAATGGAGATGTGTCGTATGTGAGCGATGTTCATTCCGCTTTCGACGACATTAGTTGGGATGAAGGAAGCTCTGTTAGTAACACCAGTGATAGTGGAAAGCCACCAACAGCTAAAGCCCCAATGAGACATAATTCCTTCAATGCATTTGACATCATATCTCTCTCACCAGGTTTTGATCTCTCAGGTTTGTTTGAGAGTGATGCGAATGAGAGGCCACAGTCTCGTTTCACGACCACGAAACCTGCATCCGCGATCGTGTCGAAGTTTGAGGAAATAGCAGAAATGGAAAGGTTCAAAGTGATGAAGAAAGATGGGATTGTTAAACTGCAGGGGAGTAAACAGGGGAGGAAAGGACAATTGGGTATAGATGCTGAAATATTTGAAGTAACACCTTCATTTTTTGTGGTGGAAGTGAAGAAAACTGCTGGAGACACATTGGAATATAGGCAATTTTACAACAAAGACATGAGACCTTGTCTTAAGGATATTGTATGGACTTGGGAAGGAAATGAGCAGCAGCAGCAACAACCACAATCACAAATTGTTTAG 1512 40.61 MEKKGTILMQRYELGRMLGQGTFAKVYHARNLNSGQSVAIKIIDKEKVLRVGLIDQIKREISVMRLVRHPNVVQLYEVMASRTKIYFAMEYVKGGELFNKVAKGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLSALAESRRQDGLLHTTCGTPAYVAPEVINKKGLNFDCFVYFALRLLTLKSLICIWYEILMNLHWQLLVKKGYDGAKADIWSSGVVLFVLLAGYLPFHDPNLMEMYRKISRGEFRCPHWFPPEVRKLLSRILDPYPHTRINMAKLMENSWFKKGFKTNVATPKQLQINGDVSYVSDVHSAFDDISWDEGSSVSNTSDSGKPPTAKAPMRHNSFNAFDIISLSPGFDLSGLFESDANERPQSRFTTTKPASAIVSKFEEIAEMERFKVMKKDGIVKLQGSKQGRKGQLGIDAEIFEVTPSFFVVEVKKTAGDTLEYRQFYNKDMRPCLKDIVWTWEGNEQQQQQPQSQIV 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7676286 7677797 + CaPI482276_03g006730.1 Cam03g0673 122939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0673 503 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Cam03g0673 503 Gene3D Transferase(Phosphotransferase) domain 1 215 348 - -
Cam03g0673 503 Gene3D Transferase(Phosphotransferase) domain 1 3 214 - -
Cam03g0673 503 Pfam Protein kinase domain 223 305 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0673 503 Pfam Protein kinase domain 12 188 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0673 503 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Cam03g0673 503 MobiDBLite consensus disorder prediction 342 362 - -
Cam03g0673 503 SMART serkin_6 12 305 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0673 503 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 479 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cam03g0673 503 FunFam Non-specific serine/threonine protein kinase 362 486 - -
Cam03g0673 503 Pfam NAF domain 365 423 IPR004041 GO:0007165(InterPro)
Cam03g0673 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0673 503 ProSiteProfiles NAF domain profile. 362 386 IPR018451 GO:0007165(InterPro)
Cam03g0673 503 CDD CIPK_C 368 482 - -
Cam03g0673 503 FunFam Maternal embryonic leucine zipper kinase 2 213 - -
Cam03g0673 503 ProSiteProfiles Protein kinase domain profile. 12 305 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0673 503 SUPERFAMILY Protein kinase-like (PK-like) 8 354 IPR011009 -
Cam03g0673 503 Gene3D Kinase associated domain 1, KA1 362 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0673 Cam-Chr3:7676286 Cam04g0654 Cam-Chr4:20732385 9.20E-168 dispersed
Cam01g2439 Cam-Chr1:36221476 Cam03g0673 Cam-Chr3:7676286 4.70E-142 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85053 PF00069 Pkinase 1.80E-55 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0673 K07198 - csv:101206082 818.535