Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0692 ATGGATGATAATGTTACCTTCAACAATAATAACCACCAATTCTTTTCGGCTGATCAACTTGAAGATTCCGACGAATCAAAACCCGCCCCTGATTCTCCTCCTCCTAATTCCGCCGCCGCCGCCACCGCCACCAAGAAGGGCAGAAGAGGGATGAAGAAGAAAGTTCTGTCGGTGAAAATTAATGGCGACAACCCAAGAAATTCCTCTGGTTCTACAACTCCACCTTCTGATGCTTGGGCCTGGAGAAAGTACGGTCAAAAGCCCATCAAAGGCTCTCCTTATCCCAGGGCGTATTATAGGTGTAGTAGTTCAAAGGGATGTCCAGCGAGGAAGCAAGTAGAGAGGAATCGGCTTGATCCAACTATGTTGCTCATTACATATTCGTGTGAGCATAATCATTCCGGTCCGGTTTCTAGGAACAATAATTCCAACCACAACCAAACCGATGCGGTGAAACCCGATTCACCGGAGACGGTTCCGGTTGAAGTAGAAGAGAAATTTGTGGAGATAGTGGGAGAGGAGTCGTTGATAACGGGAGATGAGTTTAGTTGGTTTGGAGAAATGGAAACGACGTCGTCTACAGTGCTTGAAAGCTCCATTTTTTCGGGGAGAGCATCCAGTGGATTGGTGGATCATTCAATTTCAAGTGACGTGGCAATGCTTTTGCCCATGGGGGATGATGACATGGACGAATCACTCTTTGCGGATCTCGGCGAGTTGCCGGAATGTTCTCTTGTGTTCCGGCGTGGCGGAGGTCGGGGATTACCGGTGGATGAACAACCGGCTGCAGCCCAGCGGCGGATCACACCGTGGTGTGGAACCACCACATGA 831 49.34 MDDNVTFNNNNHQFFSADQLEDSDESKPAPDSPPPNSAAAATATKKGRRGMKKKVLSVKINGDNPRNSSGSTTPPSDAWAWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQVERNRLDPTMLLITYSCEHNHSGPVSRNNNSNHNQTDAVKPDSPETVPVEVEEKFVEIVGEESLITGDEFSWFGEMETTSSTVLESSIFSGRASSGLVDHSISSDVAMLLPMGDDDMDESLFADLGELPECSLVFRRGGGRGLPVDEQPAAAQRRITPWCGTTT 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7815228 7816239 + CaPI482276_03g006920.1 Cam03g0692 122958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0692 276 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 25 244 IPR044810 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam03g0692 276 MobiDBLite consensus disorder prediction 134 153 - -
Cam03g0692 276 FunFam WRKY transcription factor 65 59 136 - -
Cam03g0692 276 MobiDBLite consensus disorder prediction 1 79 - -
Cam03g0692 276 MobiDBLite consensus disorder prediction 61 76 - -
Cam03g0692 276 MobiDBLite consensus disorder prediction 134 160 - -
Cam03g0692 276 MobiDBLite consensus disorder prediction 1 17 - -
Cam03g0692 276 Gene3D WRKY domain 63 137 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam03g0692 276 SMART WRKY_cls 75 135 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam03g0692 276 SUPERFAMILY WRKY DNA-binding domain 72 135 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam03g0692 276 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam03g0692 276 Pfam WRKY DNA -binding domain 77 133 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0692 Cam-Chr3:7815228 Cam03g0871 Cam-Chr3:10708151 1.90E-29 dispersed
Cam03g0692 Cam-Chr3:7815228 Cam07g0260 Cam-Chr7:3680006 7.80E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51658 PF03106 WRKY 6.90E-25 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0692 - - - 0.0