Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0705 CTGCTAAGAATTGTTCAGTTGGAAGTTTTAGCCATTACTGCAAATTCTGAATTGTTGGAGTTTAGTGACAAGCTTGGCTCGTTTCTTAACAAAAGCACAAACAAAGTGTATTGTTCAACATTCGCTGCTCACTGCTCTAGGAGGCTTGCTGTTGTTCGAGGGATGTTTCCTTGCGTCTTGAAGATCGAAATTTCTATTGATGTACTACAGCAAATTACGAGAACATTAGGTGCAGTTTATTGGAAATTCAATAGTGACTCTTGTGCCGTTGAAATGTTTGGGGTGACAGAAAAATCTCCCAGGGGATCTGAGACTATAATTGGTTGTGATTGCAACATCGAGAACAGTACACTTTGTCACGTCGTAAGGATAGAATTCAAAAATCACAATCTGCCCGGTGTTCTTCCACCTGAAATAGTCAAACTTCCTCACCTGCAAGTAGTTGATTTTGCTTACAACTACCTTCATGGTAATATACCTCAGGAATGGGCTTCAATGCGGCTGACATCAATCTCTCTTCTTGTAAATCGGTTATCAGGGGAAATACCAGCGGAATTGGGGAATATTACTACTCTAACATTACTGAACCTTGAAGCAAACCAATTTACTGGTGCAATACCATCACAACTCGGGAGGTTAAGCAACCTGCAAGACTTGTTGCTATCATCTAATCAATTGACTGGCACATTACCGACAACATTTGCTGGTTTGAAAAACCTAACAAATTTCCGGATAAATGATAACAACCTAAATGGAACCATACCTGAGTTCATACAGAATTGGATACTACTCAACAGATTAGAACTACATGCAAGTGGACTTCAGGGACCAATTCCTGCAAAAATATCCCTTTTGAGGAACTTAAAAGAATTAAGGATCAGTGATATTAATGGGCCAAAGCAGGATTTTCCTGAGTTGAGAAACATGACGGGCATGGTTAGATTGGTTCTGAGAAATTGTAACATTGCTGGAAAGATTCCTTCATATGTGTGGATGTTACCAGACATGGAAATGCTGGACGTCAGCTTTAACCATATAACAGGGGAAATTCCAGAGGATATAAACATGGAGCGCATTAGATTTCTCTTCTTAAGTGGCAATATGCTGAGTGGCGACCTACCAGAGTCAATCTTGAAGGATGGAACTAATGTCGATCTTTCATACAATAACTTGACATGGCAAGGCCCTGAGCAGCATGCTTGTAGAAAGAATTTGAATATGAATCTGAACTTGTTTCGAAGTTCCTCCACCGGCAACACCTTACAAGAAAGTCTCCCCTGCTTAAAGGATTCCATCTGTTCAAAATATTCAAAATGTTGGTTCGTTAATTCTGGTGGGAATGACTTAACTATGGAGGTAAACAACAGAAATGTTCTCTACAACGGGGATGCAGATGTTGAAGGTGGAACAGCAAAATTCTACATTGATCATGATAGCCACTGGGGATTGAGTAGTACTGGAGATTTCATGGATGATTTTGATTACCAAAATACACGCTACACTTTATCCCTGCCTTCATCAAATTTGTCCGAGCTATATTCAACAGCACGTCGAAGTCCAATTACGCTCACTTATTTCCATCATTGCTTGGATAATGGAAACTACTCAGTCAAGCTTCATTTTGCTGAGTTACAATTCACAGATGATAAGACATATACAAGTCTTGGAAGGCGGAAATTTGATATCTACATTCAGGATAGGTTGGTATTGGAGAATTTTGATATTGAAGAGAAGGCAGGAGGAGCTCAAAAACCAGCCGAATTGCAGTTTAATAACATTAGTGTAATTAATCATGTTCTGGAGATCCGATTCTATTGGGCTGGAAAAGGGACAACTAGAATTCCTGATAGAGGAGTTTATGGTCCACTTATATCAGCTATTTCTGTTTATTCTGATCTTAAATATTGTTCAATCCGCGAAAGTGGTAAAAAGAAAATTGTAGCAATTGCTGTTGGCATTGCGGTTGGATTATTATGCCTTGCTACAGTCATTATAGTGGGACTTCTTTGGTGGAAAGGCACTCTTAGAGCAATCAGGCGGAGTAAAGGTGGTACAGATCTTGCAGGAATAGAAGTGCAAACTGGAATTTTTACGTTGAAACAAATAAAAGCTGCCACCAATCATTTTGATTCTTGTAATAAGATTGGAGAAGGTGGCTTTGGCCCTGTTTATAAGGGTCAATTGGTTGATGGTACTATTGTAGCAATCAAGCAACTCTCGTCCAAATCAAAGCAGGGAAATCGTGAATTTCTCAATGAGATAGGAATGATCTCTTGTTTGCAACACCCAAATCTAGTCAAGCTCCATGGATGCTGTATTGAAGGGGATCAATTGTTGTTGGTGTATGAATATTTGGAAAACAATAGTCTTGCCCGAGCACTATTTGGTCCAGATTATAGTCGGCTTAATCTAGATTGGCCAACCAGGCTTAGAATCTGTATCGGTATAGCGAAAGGCTTAGCATATCTCCATGAGGAATCAAGCCTCAAAATCGTTCACAGAGACATCAAAGCTACTAATGTGCTACTGGATGGCGAATTGAATCCTAAAATATCTGATTTTGGTTTGGCTAAGCTTGACGATGAGGAGAAGACTCATATCACCACTAGAGTGGCCGGGACTATAGGATATATGGCTCCGGAATATGCACTTTGGGGTTATCTGACCTACAAAGCAGATGTGTATAGTTTTGGAGTTGTGGCCTTGGAAATTGTAAGTGGAAGAAGCAACAATGATTATGTACCAAGTGAAACTTGTGTTTGCCTTCTAGACTGGGCCTGTCACTTGCAACAATCTGGGAACCTTATGGAGTTGGTAGATGAGAAGTTGAAACCAGAAATCGACAGGAAAGAAGCGGAAAATATGGTGAAAATAGCCCTTCTCTGCACCAATGCTTCACCATCAGTAAGGCCTGTGATGTCGGAAGTGGTGAACATGCTCGAAGGACGAATGGCGATTCCAGACCTGATCCCGGAACCGAGTAGTTATAATGAAGATCTGAGGTTCAAGGCAATGAGAGATATGCGTAAACAGCAACAGAGCCAAAGCCTGAGTGAAAGCCAAACCCAAAATTCCACAATGCAAACATTTGAGTCTTCCACTACATCTGGAAATGAGTTCTATGACATCAACCCAGAGCCAAGATCATCAACAACCTGA 3159 40.46 LLRIVQLEVLAITANSELLEFSDKLGSFLNKSTNKVYCSTFAAHCSRRLAVVRGMFPCVLKIEISIDVLQQITRTLGAVYWKFNSDSCAVEMFGVTEKSPRGSETIIGCDCNIENSTLCHVVRIEFKNHNLPGVLPPEIVKLPHLQVVDFAYNYLHGNIPQEWASMRLTSISLLVNRLSGEIPAELGNITTLTLLNLEANQFTGAIPSQLGRLSNLQDLLLSSNQLTGTLPTTFAGLKNLTNFRINDNNLNGTIPEFIQNWILLNRLELHASGLQGPIPAKISLLRNLKELRISDINGPKQDFPELRNMTGMVRLVLRNCNIAGKIPSYVWMLPDMEMLDVSFNHITGEIPEDINMERIRFLFLSGNMLSGDLPESILKDGTNVDLSYNNLTWQGPEQHACRKNLNMNLNLFRSSSTGNTLQESLPCLKDSICSKYSKCWFVNSGGNDLTMEVNNRNVLYNGDADVEGGTAKFYIDHDSHWGLSSTGDFMDDFDYQNTRYTLSLPSSNLSELYSTARRSPITLTYFHHCLDNGNYSVKLHFAELQFTDDKTYTSLGRRKFDIYIQDRLVLENFDIEEKAGGAQKPAELQFNNISVINHVLEIRFYWAGKGTTRIPDRGVYGPLISAISVYSDLKYCSIRESGKKKIVAIAVGIAVGLLCLATVIIVGLLWWKGTLRAIRRSKGGTDLAGIEVQTGIFTLKQIKAATNHFDSCNKIGEGGFGPVYKGQLVDGTIVAIKQLSSKSKQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLLLVYEYLENNSLARALFGPDYSRLNLDWPTRLRICIGIAKGLAYLHEESSLKIVHRDIKATNVLLDGELNPKISDFGLAKLDDEEKTHITTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGRSNNDYVPSETCVCLLDWACHLQQSGNLMELVDEKLKPEIDRKEAENMVKIALLCTNASPSVRPVMSEVVNMLEGRMAIPDLIPEPSSYNEDLRFKAMRDMRKQQQSQSLSESQTQNSTMQTFESSTTSGNEFYDINPEPRSSTT 1052
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7920125 7932241 + CaPI482276_03g007050.1 Cam03g0705 122971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0705 1052 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 679 784 - -
Cam03g0705 1052 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 67 230 - -
Cam03g0705 1052 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 231 297 - -
Cam03g0705 1052 Gene3D Ribonuclease Inhibitor 230 297 IPR032675 -
Cam03g0705 1052 CDD STKc_IRAK 715 982 - -
Cam03g0705 1052 Gene3D - 438 633 - -
Cam03g0705 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0705 1052 FunFam Putative LRR receptor-like serine/threonine-protein kinase 785 991 - -
Cam03g0705 1052 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 299 420 - -
Cam03g0705 1052 SUPERFAMILY L domain-like 110 351 - -
Cam03g0705 1052 Gene3D Transferase(Phosphotransferase) domain 1 785 987 - -
Cam03g0705 1052 MobiDBLite consensus disorder prediction 1006 1052 - -
Cam03g0705 1052 Pfam Leucine rich repeat 191 250 IPR001611 GO:0005515(InterPro)
Cam03g0705 1052 Gene3D Phosphorylase Kinase; domain 1 674 784 - -
Cam03g0705 1052 Gene3D Ribonuclease Inhibitor 299 420 IPR032675 -
Cam03g0705 1052 Gene3D Ribonuclease Inhibitor 78 229 IPR032675 -
Cam03g0705 1052 SUPERFAMILY Protein kinase-like (PK-like) 692 982 IPR011009 -
Cam03g0705 1052 MobiDBLite consensus disorder prediction 1009 1052 - -
Cam03g0705 1052 Pfam Malectin domain 439 627 IPR021720 -
Cam03g0705 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 72 1006 IPR051824 -
Cam03g0705 1052 ProSiteProfiles Protein kinase domain profile. 709 986 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0705 1052 SMART serkin_6 709 961 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0705 1052 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 437 632 - -
Cam03g0705 1052 Pfam Protein tyrosine and serine/threonine kinase 713 980 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0705 Cam-Chr3:7920125 Cam11g1758 Cam-Chr11:30122670 4.70E-198 dispersed
Cam11g1756 Cam-Chr11:30098550 Cam03g0705 Cam-Chr3:7920125 1.60E-06 dispersed
Cam03g0705 Cam-Chr3:7920125 Cam11g1757 Cam-Chr11:30107138 1.30E-200 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85057 PF07714 PK_Tyr_Ser-Thr 4.40E-48 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0705 - - - 0.0