Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam03g0708 | ATGGAAACGAATAACAGTAACAACGGGGTGAGGTTTTTGTTGGGGAAGCAATCGTCGATGGCGCCGGACCGGAAATCGGAGGAGGAGGCGGAGGCGGAGGCGGGGGAAGACGGGGAGGAGATCGATCCAGGGGTGAGATTGATGTATTTGGCGAATGAAGGCGATTTAGAAGGGATTAAGGAGCTTCTAGATTCTGGAATTGATGTCAATTTTCACGATGTTGATAATCGGACGGCGCTTCATGTTGCTGCTTGTCAAGGCTGCTCCAAGATCGTCGATTTATTGCTCCACCGTGGCGCTGAGATTGACCCTAAAGATCGCTGGGGTAGTACGCCTCTTGCAGATGCTATATTCTACAAAAATCATGAAGTTATCAAATTGCTGGAAAAAAGAGGCGCAAAACATCTGATGGCTCCCATGCTTGTCAAGCATGCTCGTGAAGTCCCAGAATATGAAATTGATCCTAAAGAATTTGACTTCACAAACAGTGTCAACTTGACCAAGGGTACCTTCCATCTTGCATCATGGCGCGGAATCCAAGTTGCAGTCAAAGAGCTTCCCGAGGATGTGATTTCAGAGGAGGATAAAGTGAACGCCTTTAGAGATGAGCTTGCATTGCTTCAGAAGATTCGGCATCCTAATGTCGTTCAATTTCTTGGTGCTGTCACTCAAAGTAGTCCCATGATGATTGTTACTGAATATTTGCCTAAGGGAGATCTTTGTCAACTGTTACAGAGAAAAGGAGCATTAAAACCAATTGTAGCTGTGAAATTTGCCCTTGATATTGCAAGGGGAATGAACTATTTGCACGAAAATAAACCTGCCCCGATCATCCACCGTGATCTCGAGCCATCAAATATATTGCGAGATGACACTGGGAACCTGAAAGTTGCAGACTTTGGAGTTAGCAAATTGCTCACAGTCAAGGAGGATAAACCTCTAATTTGTCAAGACACTGCTTGCCGATATGTCGCTCCAGAAGTTTTCAAAAACAATGGATACGATACCAAAGTAGATGTCTTCTCCTTTGCTTTAATTCTACAAGAGATGATCGAAGGGCAACCACCGTTTTCAAACAAAAAAGAAAATGCCATTCTTAAAGAGTATGCAGCCGGAGTACGCCCTCCTTTCAAAGCTCCAGCTAAATGCTACGCCCATGGAATTAAAGAGTTGATTGAAGATTGCTGGGATGAGAAGCCATCAAAGAGACCAACTTTTAGGCAGATAATCACGAGGCTGGAAACAATTCATCACAGTCTTAGCCATAGAAGGCGTTGGAAGCTCCCAACAATGAGATGTTTTCAGGATCCAGAAGCTAAGATAAGAAGAGACCATCTCTCAAGCAGCCGGAGCCTCTCATCACGATCTGCAAGCAGCATATGA | 1383 | 44.69 | METNNSNNGVRFLLGKQSSMAPDRKSEEEAEAEAGEDGEEIDPGVRLMYLANEGDLEGIKELLDSGIDVNFHDVDNRTALHVAACQGCSKIVDLLLHRGAEIDPKDRWGSTPLADAIFYKNHEVIKLLEKRGAKHLMAPMLVKHAREVPEYEIDPKEFDFTNSVNLTKGTFHLASWRGIQVAVKELPEDVISEEDKVNAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCQLLQRKGALKPIVAVKFALDIARGMNYLHENKPAPIIHRDLEPSNILRDDTGNLKVADFGVSKLLTVKEDKPLICQDTACRYVAPEVFKNNGYDTKVDVFSFALILQEMIEGQPPFSNKKENAILKEYAAGVRPPFKAPAKCYAHGIKELIEDCWDEKPSKRPTFRQIITRLETIHHSLSHRRRWKLPTMRCFQDPEAKIRRDHLSSSRSLSSRSASSI | 460 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7946365 | 7951384 | + | CaPI482276_03g007080.1 | Cam03g0708 | 122974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam03g0708 | 460 | SUPERFAMILY | Protein kinase-like (PK-like) | 169 | 416 | IPR011009 | - | |
Cam03g0708 | 460 | SUPERFAMILY | Ankyrin repeat | 46 | 135 | IPR036770 | - | |
Cam03g0708 | 460 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cam03g0708 | 460 | FunFam | Os01g0748600 protein | 146 | 433 | - | - | |
Cam03g0708 | 460 | Pfam | Protein tyrosine and serine/threonine kinase | 172 | 413 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam03g0708 | 460 | SMART | ANK_2a | 42 | 71 | IPR002110 | GO:0005515(InterPro) | |
Cam03g0708 | 460 | SMART | ANK_2a | 108 | 137 | IPR002110 | GO:0005515(InterPro) | |
Cam03g0708 | 460 | SMART | ANK_2a | 75 | 104 | IPR002110 | GO:0005515(InterPro) | |
Cam03g0708 | 460 | Pfam | Ankyrin repeats (3 copies) | 47 | 134 | IPR002110 | GO:0005515(InterPro) | |
Cam03g0708 | 460 | FunFam | serine/threonine-protein kinase STY46-like | 153 | 236 | - | - | |
Cam03g0708 | 460 | Gene3D | - | 15 | 148 | IPR036770 | - | |
Cam03g0708 | 460 | CDD | STKc_MAP3K-like | 169 | 413 | - | - | |
Cam03g0708 | 460 | ProSiteProfiles | Ankyrin repeat profile. | 75 | 107 | IPR002110 | GO:0005515(InterPro) | |
Cam03g0708 | 460 | ProSiteProfiles | Ankyrin repeat region circular profile. | 75 | 107 | - | - | |
Cam03g0708 | 460 | Gene3D | Phosphorylase Kinase; domain 1 | 159 | 235 | - | - | |
Cam03g0708 | 460 | PIRSF | ILK | 1 | 435 | - | - | |
Cam03g0708 | 460 | ProSiteProfiles | Protein kinase domain profile. | 125 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam03g0708 | 460 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 76 | 414 | IPR051681 | GO:0004674(PANTHER) | |
Cam03g0708 | 460 | Gene3D | Transferase(Phosphotransferase) domain 1 | 236 | 451 | - | - | |
Cam03g0708 | 460 | FunFam | Integrin-linked protein kinase family | 24 | 151 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g0708 | Cam-Chr3:7946365 | Cam05g1704 | Cam-Chr5:25378121 | 2.10E-41 | dispersed | |
Cam05g2599 | Cam-Chr5:33616993 | Cam03g0708 | Cam-Chr3:7946365 | 4.60E-81 | transposed | |
Cam09g1398 | Cam-Chr9:20645108 | Cam03g0708 | Cam-Chr3:7946365 | 1.70E-86 | transposed | |
Cam01g2466 | Cam-Chr1:36405536 | Cam03g0708 | Cam-Chr3:7946365 | 1.50E-145 | wgd | |
Cam02g1897 | Cam-Chr2:32010283 | Cam03g0708 | Cam-Chr3:7946365 | 2.90E-139 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85058 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-55 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam03g0708 | - | - | - | 0.0 |