Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0708 ATGGAAACGAATAACAGTAACAACGGGGTGAGGTTTTTGTTGGGGAAGCAATCGTCGATGGCGCCGGACCGGAAATCGGAGGAGGAGGCGGAGGCGGAGGCGGGGGAAGACGGGGAGGAGATCGATCCAGGGGTGAGATTGATGTATTTGGCGAATGAAGGCGATTTAGAAGGGATTAAGGAGCTTCTAGATTCTGGAATTGATGTCAATTTTCACGATGTTGATAATCGGACGGCGCTTCATGTTGCTGCTTGTCAAGGCTGCTCCAAGATCGTCGATTTATTGCTCCACCGTGGCGCTGAGATTGACCCTAAAGATCGCTGGGGTAGTACGCCTCTTGCAGATGCTATATTCTACAAAAATCATGAAGTTATCAAATTGCTGGAAAAAAGAGGCGCAAAACATCTGATGGCTCCCATGCTTGTCAAGCATGCTCGTGAAGTCCCAGAATATGAAATTGATCCTAAAGAATTTGACTTCACAAACAGTGTCAACTTGACCAAGGGTACCTTCCATCTTGCATCATGGCGCGGAATCCAAGTTGCAGTCAAAGAGCTTCCCGAGGATGTGATTTCAGAGGAGGATAAAGTGAACGCCTTTAGAGATGAGCTTGCATTGCTTCAGAAGATTCGGCATCCTAATGTCGTTCAATTTCTTGGTGCTGTCACTCAAAGTAGTCCCATGATGATTGTTACTGAATATTTGCCTAAGGGAGATCTTTGTCAACTGTTACAGAGAAAAGGAGCATTAAAACCAATTGTAGCTGTGAAATTTGCCCTTGATATTGCAAGGGGAATGAACTATTTGCACGAAAATAAACCTGCCCCGATCATCCACCGTGATCTCGAGCCATCAAATATATTGCGAGATGACACTGGGAACCTGAAAGTTGCAGACTTTGGAGTTAGCAAATTGCTCACAGTCAAGGAGGATAAACCTCTAATTTGTCAAGACACTGCTTGCCGATATGTCGCTCCAGAAGTTTTCAAAAACAATGGATACGATACCAAAGTAGATGTCTTCTCCTTTGCTTTAATTCTACAAGAGATGATCGAAGGGCAACCACCGTTTTCAAACAAAAAAGAAAATGCCATTCTTAAAGAGTATGCAGCCGGAGTACGCCCTCCTTTCAAAGCTCCAGCTAAATGCTACGCCCATGGAATTAAAGAGTTGATTGAAGATTGCTGGGATGAGAAGCCATCAAAGAGACCAACTTTTAGGCAGATAATCACGAGGCTGGAAACAATTCATCACAGTCTTAGCCATAGAAGGCGTTGGAAGCTCCCAACAATGAGATGTTTTCAGGATCCAGAAGCTAAGATAAGAAGAGACCATCTCTCAAGCAGCCGGAGCCTCTCATCACGATCTGCAAGCAGCATATGA 1383 44.69 METNNSNNGVRFLLGKQSSMAPDRKSEEEAEAEAGEDGEEIDPGVRLMYLANEGDLEGIKELLDSGIDVNFHDVDNRTALHVAACQGCSKIVDLLLHRGAEIDPKDRWGSTPLADAIFYKNHEVIKLLEKRGAKHLMAPMLVKHAREVPEYEIDPKEFDFTNSVNLTKGTFHLASWRGIQVAVKELPEDVISEEDKVNAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCQLLQRKGALKPIVAVKFALDIARGMNYLHENKPAPIIHRDLEPSNILRDDTGNLKVADFGVSKLLTVKEDKPLICQDTACRYVAPEVFKNNGYDTKVDVFSFALILQEMIEGQPPFSNKKENAILKEYAAGVRPPFKAPAKCYAHGIKELIEDCWDEKPSKRPTFRQIITRLETIHHSLSHRRRWKLPTMRCFQDPEAKIRRDHLSSSRSLSSRSASSI 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7946365 7951384 + CaPI482276_03g007080.1 Cam03g0708 122974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0708 460 SUPERFAMILY Protein kinase-like (PK-like) 169 416 IPR011009 -
Cam03g0708 460 SUPERFAMILY Ankyrin repeat 46 135 IPR036770 -
Cam03g0708 460 MobiDBLite consensus disorder prediction 1 39 - -
Cam03g0708 460 FunFam Os01g0748600 protein 146 433 - -
Cam03g0708 460 Pfam Protein tyrosine and serine/threonine kinase 172 413 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0708 460 SMART ANK_2a 42 71 IPR002110 GO:0005515(InterPro)
Cam03g0708 460 SMART ANK_2a 108 137 IPR002110 GO:0005515(InterPro)
Cam03g0708 460 SMART ANK_2a 75 104 IPR002110 GO:0005515(InterPro)
Cam03g0708 460 Pfam Ankyrin repeats (3 copies) 47 134 IPR002110 GO:0005515(InterPro)
Cam03g0708 460 FunFam serine/threonine-protein kinase STY46-like 153 236 - -
Cam03g0708 460 Gene3D - 15 148 IPR036770 -
Cam03g0708 460 CDD STKc_MAP3K-like 169 413 - -
Cam03g0708 460 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515(InterPro)
Cam03g0708 460 ProSiteProfiles Ankyrin repeat region circular profile. 75 107 - -
Cam03g0708 460 Gene3D Phosphorylase Kinase; domain 1 159 235 - -
Cam03g0708 460 PIRSF ILK 1 435 - -
Cam03g0708 460 ProSiteProfiles Protein kinase domain profile. 125 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0708 460 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 76 414 IPR051681 GO:0004674(PANTHER)
Cam03g0708 460 Gene3D Transferase(Phosphotransferase) domain 1 236 451 - -
Cam03g0708 460 FunFam Integrin-linked protein kinase family 24 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0708 Cam-Chr3:7946365 Cam05g1704 Cam-Chr5:25378121 2.10E-41 dispersed
Cam05g2599 Cam-Chr5:33616993 Cam03g0708 Cam-Chr3:7946365 4.60E-81 transposed
Cam09g1398 Cam-Chr9:20645108 Cam03g0708 Cam-Chr3:7946365 1.70E-86 transposed
Cam01g2466 Cam-Chr1:36405536 Cam03g0708 Cam-Chr3:7946365 1.50E-145 wgd
Cam02g1897 Cam-Chr2:32010283 Cam03g0708 Cam-Chr3:7946365 2.90E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85058 PF07714 PK_Tyr_Ser-Thr 3.00E-55 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0708 - - - 0.0