Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0750 ATGGCGGCCTCAACAATGGCTCTGTCCTCGCCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCTCCCCTGAGCTTCTTGGCAATGGCAGAGTCAGTATGAGGAAATCCGCTGCCAAACCTGTTTCTTCTGGAAGCCCATGGTACGGACCCGACCGTGTTAAGTATTTGGGGCCATTCTCCGGCGAGCCTCCGTCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTCTAGGTGGGCCATGCTCGGAGCGCTGGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAACGGCGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTAGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCATGGGGGCCGTCGAGGGATACCGTATCGCCGGTGGCCCACTTGGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGGTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA 798 56.39 MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVSMRKSAAKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8378243 8380470 - CaPI482276_03g007500.1 Cam03g0750 123016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0750 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cam03g0750 265 Pfam Chlorophyll A-B binding protein 65 232 IPR022796 -
Cam03g0750 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Cam03g0750 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cam03g0750 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 265 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2494 Cam-Chr1:36640626 Cam03g0750 Cam-Chr3:8378243 3.00E-149 dispersed
Cam01g2495 Cam-Chr1:36643198 Cam03g0750 Cam-Chr3:8378243 1.20E-149 dispersed
Cam02g1907 Cam-Chr2:32135436 Cam03g0750 Cam-Chr3:8378243 9.00E-146 dispersed
Cam03g0750 Cam-Chr3:8378243 Cam10g1500 Cam-Chr10:28771723 2.90E-136 dispersed
Cam03g0750 Cam-Chr3:8378243 Cam03g0751 Cam-Chr3:8384069 2.10E-14 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0750 K08912 - rcu:8289767 526.939