Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam03g0805 | ATGTTGGAACACCTCGCCCGAGAATCAGACGAGGAGCTTGGTTACGAAGCAGCTGTTAATTCAAATTCCAGTCAAAATTCTATGAGCAGTGAGAGTTGTAGTAGTTTCAGTCGTCTCTCCTTTGATGCTGCCATTGATTTACCTACCTCTCGATCTTCGCCGGAGAGTCTTGATTTGAAGCCTCATCGATCGTCTGATTTCGCTTACTCCGCTATTCGTCGACGGAAATCTAAGCTTACGTTTCGTGATTTTCGACTTCTCCGTCGGATTGGTGCTGGCGACATTGGGACTGTTTATTTATGTCAGTTGAGGAAGCTGAGCGAGGGGTGTTATGAGGAGGAAGATGATGATCCGTGTTTGTATGCGATGAAAGTTGTGGATAAAGAAGCGTTGGAATTGAAGAAGAAAGTGCAGAGGGCGGAAATGGAGAGGAGAATATTGAAGATGCTGGATCATCCGTTTTTGCCTACACTCTACGCTGAGTTTGAGGCTTCTCATTTCTCTTGTATTGTTATGGAGTTCTGTTCCGGCGGCGATTTGCATTCTCTCCGCCATAAACAGCCGCGGAAACGCTTCTCTCTCACTTCCGCGAGGTTTTATGCAGCTGAAGTTCTTGTTGCTTTAGAGTACCTTCATATGCTTGGAATCATTTACAGAGACCTTAAACCGGAGAATGTTCTCGTCCGATCAGACGGTCACATTATGTTATCGGATTTCGATTTATCTCTCTGCTCCGACGCCACCCCTGCCGTTGAATCACCCAACTCCTCCCCTACCACGGCGTTTCCCGACGCAACGGCCTACCCCAGAACCAACGCTGCCGTTACCGCCGCCTCCACAACTCCTTTTTCCTGCCTCTACAACCGTCTTTTCCGGTCGCGCAAGGTCCAAACTCTGACCCCCAACTGGCTCTTTGTCGCAGAGCCCGTTTCCGCTCGGTCCTGCTCTTTCGTCGGTACCCACGAGTACGTCTCGCCGGAAGTTGCCGCCGGCGGGTCCCACGGTAACGCCGTTGACTGGTGGGCCTTTGGAATATTTCTCTACGAGTTGATCTACGGCCGCACGCCGTTTGCGGCTTCGTCCAACGAGACGACGCTAAGGAACATTATAAAGAAGCCGTTGACGTTTCCGACTGCGGTGCCGTCTGGCGCGCTTGAGCACCACGCGCGGGACCTCATATCCGGATTGCTTAACAAGGATCCGACCCGGAGACTTGGGTCGAAACGCGGGTCCGCCGACATCAAGAAGCATCCGTTCTTCAAGGGGCTCAACTTCGCCTTAATTCGGTCGCTCACTCCGCCGGAAATTCCCGGCGTACGACGGCGGAAGCAGACTCCCGTTCCGGCGGCCAAGAGCAAGGACAAGCCGGGTCAGTCAGCCGGGTTCGATTACTTCTGA | 1398 | 52.43 | MLEHLARESDEELGYEAAVNSNSSQNSMSSESCSSFSRLSFDAAIDLPTSRSSPESLDLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRKLSEGCYEEEDDDPCLYAMKVVDKEALELKKKVQRAEMERRILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPNSSPTTAFPDATAYPRTNAAVTAASTTPFSCLYNRLFRSRKVQTLTPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGIFLYELIYGRTPFAASSNETTLRNIIKKPLTFPTAVPSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEIPGVRRRKQTPVPAAKSKDKPGQSAGFDYF | 465 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9223956 | 9225936 | - | CaPI482276_03g008050.1 | Cam03g0805 | 123071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam03g0805 | 465 | SMART | serkin_6 | 84 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam03g0805 | 465 | MobiDBLite | consensus disorder prediction | 436 | 465 | - | - | |
Cam03g0805 | 465 | FunFam | serine/threonine-protein kinase D6PK-like | 312 | 438 | - | - | |
Cam03g0805 | 465 | MobiDBLite | consensus disorder prediction | 16 | 32 | - | - | |
Cam03g0805 | 465 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 216 | 228 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam03g0805 | 465 | Pfam | Protein kinase domain | 314 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam03g0805 | 465 | Pfam | Protein kinase domain | 85 | 244 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam03g0805 | 465 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 436 | IPR011009 | - | |
Cam03g0805 | 465 | PANTHER | FLIPPASE KINASE 1-RELATED | 24 | 443 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cam03g0805 | 465 | CDD | STKc_phototropin_like | 82 | 443 | - | - | |
Cam03g0805 | 465 | ProSiteProfiles | Protein kinase domain profile. | 84 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam03g0805 | 465 | FunFam | protein kinase PINOID | 175 | 243 | - | - | |
Cam03g0805 | 465 | Gene3D | Transferase(Phosphotransferase) domain 1 | 175 | 242 | - | - | |
Cam03g0805 | 465 | Coils | Coil | 123 | 150 | - | - | |
Cam03g0805 | 465 | Gene3D | Phosphorylase Kinase; domain 1 | 82 | 174 | - | - | |
Cam03g0805 | 465 | Gene3D | Transferase(Phosphotransferase) domain 1 | 313 | 438 | - | - | |
Cam03g0805 | 465 | FunFam | protein kinase PINOID 2 | 82 | 174 | - | - | |
Cam03g0805 | 465 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g0805 | Cam-Chr3:9223956 | Cam11g0261 | Cam-Chr11:4118341 | 9.90E-108 | dispersed | |
Cam03g0805 | Cam-Chr3:9223956 | Cam02g2273 | Cam-Chr2:35358595 | 7.30E-103 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85061 | PF00069 | Pkinase | 1.10E-31 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam03g0805 | - | - | - | 0.0 |