Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0910 ATGGGTTCTTTGCCTTCCGAAGCTTTGGCCGTCGAAATTACCGACACCCATATTCATACCGTCGCCGGTGCCGGCGCAGAAACCTCTGAATGGCTTCTCAATTCCCCCAACCCTCCAACTTTGTGGGAAGAAATTGTGGACGCCATCAAAGGAAATGCCGTTCCTCGAAGTTGCACAAAGAACCCCAACAAAAACACTTCTTCTTCTTCAAGCTCTGGAAAACAGAGCATTTTCAAAACGATACTTTCCCTTCTGCAGAGAGTGTTCCCGATCCTTAAATTGCCTCGAAATTACAAAGCCTCCAAGTTCAAAAACGACCTCATGGCTGGTTTAACACTCGCCAGTCTCAGCATCCCTCAGAGTATTGGGTATGCTAACTTGGCAAAGCTTGATCCTCAGTTCGGTCTCTATACAAGTGTTGTTCCTCCTTTGATTTATGCATTTATGGGGAGTTCGAGAGAGATAGCGATTGGACCGGTGGCTGTGGTTTCATTGCTTCTTTCGTCTATGCTTCAAGAAATTCAAGATCCTGTTGCAGACTCAGTTGCTTATAGAAGGCTTGTTTTCACTGTAACTTTATTTGCAGGGATTTTCCAAGCATCATTTGGACTCTTGAGACTGGGTTTTCTTGTGGACTTCCTATCTCATGCTGCCATTGTTGGGTTCATGGCTGGGGCTGCCATTCTCATTGGTCTTCAACAAATGAAAGGCTTACTTGCCATCAGCAACTTCACCACTAAAACTGATGTGGTTTCTGTTTTGGAGTCTGTGGTGAAATCTGTTCACCAGACTTGGTACCCTTTGAACATTGTACTTGGCTGCTCCTTCCTAATCTTTCTCCTTGTAGCCAGGTTCATAGGCAGAAGGAAGAAGAAGCTATTTTGGGTGTCAGCCATTGCTCCTCTCATATCAGTTATTCTCTCCACTTTGATAGTGTTTGTTTCAAGAGCTGACAAACATGGAGTTAAGATAGTGAAGGAAGTGAAAGAAGGACTGAACCCAATCTCCATTCATCAGCTTCAATTGAACAGCTCAACTGTTGGGTTAGCTGCAAAAGCTGGCCTCATTGCTGCCCTTATAGCTCTCACAGAAGCCATCGCGGTGGGCCGATCGTTCGCCTCGATTAAAGGCTACAGCATTGATGGGAACAAGGAGATGATAGCCATGGGATTGATGAACATAATAGGCTCTTTAACATCTTGTTACATAGCGACTGGGTCATTCTCAAGAACTGCTGTGAATTATAGTGCTGGGTGTGAAAGTGTATTGTCAAATATAGTGATGGCAATAACAGTGATGGTGACACTGCAATTTATGACTCGGTTTCTTTACTTTACTCCAATGGCCATTTTGGCTTCAATCATTCTCTCAGCTCTTCCTGGTCTCATTGACATTAATGAAGCTTTGCATATTTGGAAGGTTGATAAGCTTGACTTTCTTGCTTGTCTTGGCGCTTTCCTTGGTGTCTTGTTTCATTCCGTCGAATTTGGCCTTCTTGTAGCGGTTGGAATTTCATTTGCAAAGATATTGTTGATTTCAGTAAGACCAGCCACAGAAGAGGTGGGAAGGCTTCCAAGAAGTGAGATGTTTTGCAACATGAAGCAATTCCCCATGGCCACCAAAACTCAAGGACTCTCCATTATCAGAATTAACTCTGCCTTGCTTTGTTTTGCCAATGCTAGTTTCATTAGAGACAGGATAATGAGATTGGTGGAAGATGATAATGATGATGATATTGAAGAAAAAACAGCAAAAGATCAACCTAAACAAGTAGTTGTTGACATGTGCAATGTTTTGAATATCGATACCTCAGGAATCATTGCTTTAGAGGAACTTCACAAAAGGTTGTTGTTGCACGGCATTCAAGTAACAATAGCCAGTCCAAAATGGGAAGTGATCCACAAACTAAAAAAGACAAACTTTGTTGAAAGAATTGAAGGAAGGGTTTTCCTATCAGTTGGTGAAGCTGTGGATTCCTGCCTTGGAAATGCTTCCAAATTGCCTTCTCCCTTACCAAAGTCATTGTGA 2028 42.8 MGSLPSEALAVEITDTHIHTVAGAGAETSEWLLNSPNPPTLWEEIVDAIKGNAVPRSCTKNPNKNTSSSSSSGKQSIFKTILSLLQRVFPILKLPRNYKASKFKNDLMAGLTLASLSIPQSIGYANLAKLDPQFGLYTSVVPPLIYAFMGSSREIAIGPVAVVSLLLSSMLQEIQDPVADSVAYRRLVFTVTLFAGIFQASFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQMKGLLAISNFTTKTDVVSVLESVVKSVHQTWYPLNIVLGCSFLIFLLVARFIGRRKKKLFWVSAIAPLISVILSTLIVFVSRADKHGVKIVKEVKEGLNPISIHQLQLNSSTVGLAAKAGLIAALIALTEAIAVGRSFASIKGYSIDGNKEMIAMGLMNIIGSLTSCYIATGSFSRTAVNYSAGCESVLSNIVMAITVMVTLQFMTRFLYFTPMAILASIILSALPGLIDINEALHIWKVDKLDFLACLGAFLGVLFHSVEFGLLVAVGISFAKILLISVRPATEEVGRLPRSEMFCNMKQFPMATKTQGLSIIRINSALLCFANASFIRDRIMRLVEDDNDDDIEEKTAKDQPKQVVVDMCNVLNIDTSGIIALEELHKRLLLHGIQVTIASPKWEVIHKLKKTNFVERIEGRVFLSVGEAVDSCLGNASKLPSPLPKSL 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11733714 11740162 - CaPI482276_03g009100.1 Cam03g0910 123176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0910 675 Gene3D STAS domain 515 662 IPR036513 -
Cam03g0910 675 SUPERFAMILY SpoIIaa-like 542 660 IPR036513 -
Cam03g0910 675 CDD STAS_SulP_like_sulfate_transporter 536 651 - -
Cam03g0910 675 PANTHER SULFATE TRANSPORTER 74 661 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam03g0910 675 MobiDBLite consensus disorder prediction 56 73 - -
Cam03g0910 675 ProSitePatterns SLC26A transporters signature. 132 153 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cam03g0910 675 Pfam Sulfate permease family 103 483 IPR011547 GO:0016020(InterPro)
Cam03g0910 675 ProSiteProfiles STAS domain profile. 555 660 IPR002645 -
Cam03g0910 675 Pfam STAS domain 537 656 IPR002645 -
Cam03g0910 675 NCBIfam sulfate permease 90 653 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam03g0910 675 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0910 Cam-Chr3:11733714 Cam09g1672 Cam-Chr9:29024442 1.40E-163 dispersed
Cam03g0910 Cam-Chr3:11733714 Cam03g0913 Cam-Chr3:11775774 2.10E-167 proximal
Cam07g0973 Cam-Chr7:23666663 Cam03g0910 Cam-Chr3:11733714 1.70E-222 transposed
Cam11g1556 Cam-Chr11:28362295 Cam03g0910 Cam-Chr3:11733714 4.30E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0910 K17469 - csv:101211892 1116.68