Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam03g0923 | ATGCCTCGGGTCACATATCCTGCTCGGAAACTGAGTCCGAGAACAAGTGATATGGCCGATGGAGAAGAACAGCAGGGTGAATGCTGGGGTGGCTCCACTGGGGCATCGGGTTTTGACTTGGGCAACAAAAGTTTTGGCATTGCAGATGTACGTTCGACGTCGATTGTAATTGTACAGAGTAAGATTTTTAGAAGTATTAGCCATTGTGTGTACGAGGAGTTGGGGGGAGGGGGAAAGGAAAGAGTTGCTGCTGTGAAGCTTACGCTCCTAGGATTTGTAATAAGGCGGTCCATAATTTGGCCAATCAAGCTATTCATTCTTCCTTTTCTCATTTTCTGGACTTATGATTCTCCCTTGTGGCTTGTCAATTTAGTGGAGGCTGAGAGGATCGGATGGGATCTGGAGGAGGCCCAGGCCTCTGCTGCCTACGACGGTTTCCGAGCTCTGCCTCTGCATACGAAGCCCCAAGCCGCGATGGGCTCCATAGACGTCCAATCAACCAACTCTGAAAATGGATCCGCCGCCGCCTCTGCTGATGGTCGTCAAAAGCCAGTTCCCGCCGACGGTTTGAACCAGACATCTAACGAGCCAGACGGAACGGCGCCTGAGAAGCCTAAGGAATTGGGGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTAGATGTCGGCACCCGCGTCATGTGCCGCTGGAGGGACGGGAAGTACCATCCCGTTAAGGTCATCGAGCGTCGGAAGTTGCAGGCAACTGGTTTTAGTGACTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGATTCAGTTGAGACGGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGGTTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACCCATGTTGAGGGTCATGAGGAACTTGATGCTGCCAGCTTGAGGGAGCATGAAGAATTTACGAAAGTGAAAAATATTGCAACAATTGAACTTGGAAGATACGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCAGAGTACAATGACACTACAAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTGAAGCATCCTCCTGGTGATGAAATTTATCGATGTGGTACTTTATCAATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTCTGTTACTTAGCAAAGTTATTTCTGGACCACAAGACTCTCTACTATGATGTCGACCTTTTTCTGTTTTATGTCCTGTGCGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTATGGCAAGTTCTTAATAGCTTTTTCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGGACTCCTGAAAGACCTCTTTCAGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGAGTTCTTTTAGACATCTTGAAAAAGCACAAGGCCAATATCTCTATCAAGGAGCTAAGTGACATGACAGCTATCAAAGCCGAAGATATTTTGAACACACTTCAGAGTCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCTGACCCGAAGGTGCTGGATCGTCATCTCAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAGGGTACTGCTTGTGAAGGATATTAA | 1839 | 46.55 | MPRVTYPARKLSPRTSDMADGEEQQGECWGGSTGASGFDLGNKSFGIADVRSTSIVIVQSKIFRSISHCVYEELGGGGKERVAAVKLTLLGFVIRRSIIWPIKLFILPFLIFWTYDSPLWLVNLVEAERIGWDLEEAQASAAYDGFRALPLHTKPQAAMGSIDVQSTNSENGSAAASADGRQKPVPADGLNQTSNEPDGTAPEKPKELGPTKKRMSSMLPLDVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLDSVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQGTACEGY | 612 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 12128387 | 12139053 | - | CaPI482276_03g009230.1 | Cam03g0923 | 123189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam03g0923 | 612 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Cam03g0923 | 612 | PANTHER | HISTONE ACETYLTRANSFERASE | 192 | 605 | IPR050603 | GO:0000790(PANTHER)|GO:0003712(PANTHER)|GO:0045892(PANTHER)|GO:0045944(PANTHER) | |
| Cam03g0923 | 612 | Pfam | MOZ/SAS family | 391 | 568 | IPR002717 | GO:0004402(InterPro)|GO:0006355(InterPro) | |
| Cam03g0923 | 612 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 331 | 602 | IPR016181 | - | |
| Cam03g0923 | 612 | Gene3D | - | 509 | 589 | IPR036388 | - | |
| Cam03g0923 | 612 | FunFam | Histone acetyltransferase | 509 | 588 | - | - | |
| Cam03g0923 | 612 | FunFam | Histone acetyltransferase | 211 | 330 | - | - | |
| Cam03g0923 | 612 | CDD | CBD_MOF_like | 224 | 293 | - | - | |
| Cam03g0923 | 612 | FunFam | Histone acetyltransferase | 329 | 386 | - | - | |
| Cam03g0923 | 612 | Pfam | RNA binding activity-knot of a chromodomain | 221 | 279 | IPR025995 | - | |
| Cam03g0923 | 612 | CDD | NAT_SF | 442 | 500 | - | - | |
| Cam03g0923 | 612 | MobiDBLite | consensus disorder prediction | 165 | 215 | - | - | |
| Cam03g0923 | 612 | Gene3D | - | 331 | 387 | - | - | |
| Cam03g0923 | 612 | Pfam | MYST family zinc finger domain | 332 | 386 | IPR040706 | - | |
| Cam03g0923 | 612 | Gene3D | - | 389 | 601 | - | - | |
| Cam03g0923 | 612 | FunFam | Histone acetyltransferase | 389 | 516 | - | - | |
| Cam03g0923 | 612 | SMART | chromo_7 | 235 | 294 | IPR000953 | - | |
| Cam03g0923 | 612 | SUPERFAMILY | Chromo domain-like | 212 | 331 | IPR016197 | - | |
| Cam03g0923 | 612 | Gene3D | - | 211 | 330 | - | - | |
| Cam03g0923 | 612 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 330 | 601 | IPR002717 | GO:0004402(InterPro)|GO:0006355(InterPro) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam03g0923 | K11308 | - | csv:101217824 | 897.501 |