Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0931 ATGAATCGGCTGCCTCAGTTTTTTTCTCCTAGGAAGAAAGGAAAACCCATGGATCCGAGGAAAATCGCTGGGAAACCCAAGCTTGGCCGACTTAATGCGGCCAAGAACATTGACTATGATGCTACTTCCTCGTCTTCTTCGCTTGAAGATTCTTCTGGGTCTCTCTATACTCGCTCCATGGAGACCCCCGATCCCTCCAGTTTTCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACTTTAGGGCTAGATGGCCCTGACGACTTTGCTATTCCGATGGAGGCATGGGAGGCTAGAAAGGTTCGTTCATCTTCCGAGCTTCTACCGAGGTCGAGGCTGTATCCCATGGACACCTCCCCGAAGACCGAGGAGATTAGTAAGGATAAGGAAGATAAAGAAATGGAAGATGAATTGTGCCGGAGAGTTAAGGATTCAGTTCGAATTAGCGTCGAGCTGTCCACGCCTAAGTCGGAATTTCCAGAGTTGAATGAACGCCGGATGGCTACTGCTACTGGATGTAGTTCGAGAAGTGGAATCAATGGTGCTCGGCCTCCTTTACTCAAGCCACCGCCGTCGATGAGGCTTCCAAATTTGGATAATACTTGCTCCACTTGGGACATTTTGAAAGCTTTTGCTCCATTAGTTGATGATGAACATCAGGAGGAAGTAGGAGAACGAGTGGAACCATTAGTTGAAGGAGAAGGAGAGGGAAATATTGTGAGGCCCGTGATGCGCATAGGGTCTTGGGGTTCCTTCACGACCTCGAATGACGATGATTCTTCGAGCAGTACTACGGAGCCTGCAAATATTTCACCCAATATGAGAGGTTGTCCCATTATCACATCCTGGGTGGTCGGCAGGCTTCTTGGACGCGGTTCATTTGGATCAGTATACGAAGCAATTTCAGAGGATGGTACGTTCTTTGCACTGAAAGAAGTTTCACTGCTCGAGGATGATAGTCAGGGAAGACAAAGTATCGATCAACTTCAGCAGGAGATAGCTCTTCTAAGTGAGTTTGAGCATGAGAACATAGTTCAGTACTACGGCACGCATTCGGATGGGTCAAAACTCTATATCTTCCTCGAGCTTGTATCTCAGGGCTCCCTTATGAGTCTATATCAAAGGACAATCCTTATGGACTCCATTGTTTCTGCCTACACAAGGCAGATTCTGTCTGGTTTAAAGTATCTTCATGAGCGAAATGTGGTTCACAGGGATATTAAATGTGCTAATATATTGGTGGATAAAAATGGATCTGTGAAGCTCGCAGATTTTGGTTTGGCGAAGGCAACAAAATTGAACGACGTTAAATCTTGTAAGGGAACTGCGTATTGGATGGCACCTGAGGTGGTTAATGGGAAGGGTCAAGGATATGGTCTTCCGGCCGATATCTGGAGCCTTGGGTGCACAGTATTGGAAATGTTAACTCGAAAGCTTCCATATTCAGAACTCGAATCTCATATGCAAGCACTATTTAGGATTGGAAAAGGCAAACCGCCTGCAGTTCCCGAGTCTCTCCCAAAAGATGCACAGGATTTCATTCGGCAGTGCCTACAAGTTAATCCAAAGGACCGTCCTACTGCTGCTGATCTATTAAATCACTCGTTTGTGAAAAGACCAGTTTCCAGTTTATCAGGGTCGGCATCTCCTTACAACAGGCCAGGCAGAAGGATTTAA 1686 46.32 MNRLPQFFSPRKKGKPMDPRKIAGKPKLGRLNAAKNIDYDATSSSSSLEDSSGSLYTRSMETPDPSSFRIKGLDGEVDLICRTLGLDGPDDFAIPMEAWEARKVRSSSELLPRSRLYPMDTSPKTEEISKDKEDKEMEDELCRRVKDSVRISVELSTPKSEFPELNERRMATATGCSSRSGINGARPPLLKPPPSMRLPNLDNTCSTWDILKAFAPLVDDEHQEEVGERVEPLVEGEGEGNIVRPVMRIGSWGSFTTSNDDDSSSSTTEPANISPNMRGCPIITSWVVGRLLGRGSFGSVYEAISEDGTFFALKEVSLLEDDSQGRQSIDQLQQEIALLSEFEHENIVQYYGTHSDGSKLYIFLELVSQGSLMSLYQRTILMDSIVSAYTRQILSGLKYLHERNVVHRDIKCANILVDKNGSVKLADFGLAKATKLNDVKSCKGTAYWMAPEVVNGKGQGYGLPADIWSLGCTVLEMLTRKLPYSELESHMQALFRIGKGKPPAVPESLPKDAQDFIRQCLQVNPKDRPTAADLLNHSFVKRPVSSLSGSASPYNRPGRRI 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12289869 12294947 + CaPI482276_03g009310.1 Cam03g0931 123197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0931 561 SMART serkin_6 286 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 MobiDBLite consensus disorder prediction 1 69 - -
Cam03g0931 561 MobiDBLite consensus disorder prediction 124 139 - -
Cam03g0931 561 MobiDBLite consensus disorder prediction 37 64 - -
Cam03g0931 561 Gene3D Transferase(Phosphotransferase) domain 1 284 554 - -
Cam03g0931 561 SUPERFAMILY Protein kinase-like (PK-like) 267 547 IPR011009 -
Cam03g0931 561 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 121 542 IPR050538 -
Cam03g0931 561 ProSiteProfiles Protein kinase domain profile. 286 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 PRINTS Tyrosine kinase catalytic domain signature 465 487 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 PRINTS Tyrosine kinase catalytic domain signature 364 377 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 PRINTS Tyrosine kinase catalytic domain signature 399 417 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 PRINTS Tyrosine kinase catalytic domain signature 509 531 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524(InterPro)
Cam03g0931 561 MobiDBLite consensus disorder prediction 173 196 - -
Cam03g0931 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 FunFam Mitogen-activated protein kinase 1, putative, expressed 284 552 - -
Cam03g0931 561 Pfam Protein kinase domain 287 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g0931 561 MobiDBLite consensus disorder prediction 253 274 - -
Cam03g0931 561 MobiDBLite consensus disorder prediction 115 139 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0931 Cam-Chr3:12289869 Cam05g0978 Cam-Chr5:8845141 7.30E-65 dispersed
Cam03g0931 Cam-Chr3:12289869 Cam01g1708 Cam-Chr1:30668315 2.50E-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85065 PF00069 Pkinase 3.80E-71 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0931 K13414 - csv:101218538 1010.36