Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1066 ATGGGATCCTGCTTGTCTGCAGGAAGTAAGGAGGCCATTACTGGTTCCTCTGTATCTCCTGTGTTGGGAGCAATTAAGCAGAAAGACTCAGACAATGTGTTTGAGCAGCAGAATCAGGGTGAAGCGACAGTACACAGAATTCCTGGTAGGATGTTCTTGAATGGGTCCAGTGAAGTTGCTTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTTTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCCCTGAAACTGACTGCACATTGGGAAGCTAACGAAGACATTTCAGAAGAGTTAGGTTGTAAAACAGAAGCTGTTAACAATGAAGATTCTACCTTAGAAATTAGTTGGAAGGAAGATAGTTCTCCCCTTACGCAGCCAGAAATTTCTGAAAAACTGAAGGAATCATTTCTGAAGGCTTTTCAGATAATGGATGGAGAACTCAAAATTCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGGGACTCTCGGGCTGTGCTGGGTACCAGAGATGAGGATAATTCTCTCCAAGCGGTTCAATTGACCATAGATCTCAAGCCAGATATTCCAGGGGAAGCTGAGAGAATTCTCAAATGCAAAGGTCGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTAGAGTATGGCTTCCAAACAATGATTCCCCCGGGCTGGCGATGGCTCGATCTTTTGGAGACTTTTGCCTCAAGGATTTCGGTCTAATTTCTGTTCCTGAAATATCATATCGTTTTCTGTCTGACAAGGACGAGTTTATAGTTTTAGCTACAGACGGAATTTGGGATGTTCTTTCAAACAAAGAGGTAGTTGACATTGTAGCAGCAGCCCCAGCTCGTTGTGCAGCCCGGTCATTGGTTGAGTCTGCAACTGAAGCATGGAGATGCAAGCTTCCTTCTTCCAACATTGACGACTGTGCCGTTGTCTGTCTCTTCCTCGACTCGAACTTGAACGTTATGGCATCAGAGACAAATATTAAATACAAGGAGGTTAAATCAGCAATCCAAGCTGAGACGGCCACGGTTAGGATGTGTTTGAAGACTTGGAAGCTCGACTCAATCCATACCTACTGCTTCATTCGATTGTTACTACTTCCAACCTTGTTACTCAACAATTATTCTTCCTAG 1290 44.03 MGSCLSAGSKEAITGSSVSPVLGAIKQKDSDNVFEQQNQGEATVHRIPGRMFLNGSSEVASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANEDISEELGCKTEAVNNEDSTLEISWKEDSSPLTQPEISEKLKESFLKAFQIMDGELKIQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDEDNSLQAVQLTIDLKPDIPGEAERILKCKGRVFAHQDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLSDKDEFIVLATDGIWDVLSNKEVVDIVAAAPARCAARSLVESATEAWRCKLPSSNIDDCAVVCLFLDSNLNVMASETNIKYKEVKSAIQAETATVRMCLKTWKLDSIHTYCFIRLLLLPTLLLNNYSS 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19505095 19509527 + CaPI482276_03g010660.1 Cam03g1066 123332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1066 429 ProSiteProfiles PPM-type phosphatase domain profile. 59 367 IPR001932 -
Cam03g1066 429 SMART PP2C_4 48 365 IPR001932 -
Cam03g1066 429 CDD PP2Cc 59 367 IPR001932 -
Cam03g1066 429 SUPERFAMILY PP2C-like 57 368 IPR036457 -
Cam03g1066 429 PANTHER PROTEIN PHOSPHATASE 46 366 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam03g1066 429 Pfam Protein phosphatase 2C 152 330 IPR001932 -
Cam03g1066 429 Gene3D - 55 373 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1066 Cam-Chr3:19505095 Cam11g0973 Cam-Chr11:16193590 2.70E-144 dispersed
Cam03g1066 Cam-Chr3:19505095 Cam02g1797 Cam-Chr2:31062390 8.00E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1066 - - - 0.0