Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1098 ATGGCCGCGACTAGACCCAAACGGCGGAATCAGTTGTCCATCTCCATCCTACTACTTCTTTTCTCACTCTCCGTCCTTCTCTCTGTTTCTTCCGGCCGCGAAACCTCCTCCTTCATCAACCACCGCAAGATAGCCGCGGTTGGAACTTCCTCTTCTTCCACTTCGAACTCCAGCTACGCTGTGATTTTGGACGCCGGAAGCTCAGGCAGCCGGGTCCACGTCTTTCACTTCGATGGGAATATGGATTTGCTGTTCATGGGTTCAGAGATTGAGGTTTTCTCACAGATAAAGCCAGGGTTGAGTTCATACGCGGATGATCCTAAGAAAGCCGCGGATTCTCTAATTCCTTTAGTGGAGAAAGCAGAAAATGCGGTTCCTCAGAAAGTGCAATCCGTGACGCCGATTCGCCTAGGGGCGACGGCAGGGCTTAGGTTTGTGGAAGGGGACAGATCTGAGAGGATTTTGGAAGCGGTAAGGGTTGTTCTGAAAACCAGGAGCAGATTCAAGTATGAACAGGATTCAGTTTCCATTTTAGATGGAAATCAAGAAGGCTCTTATCAATGGTTGACAATAAACTATTTGCTAGAGAATTTGGGGAAGAAATACTCAAAAACAGTGGGAGTAATTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCAATTTCTGATGAAGATGCAGCAAAGGCACCCATTGCTTCAGATGGAAACACCAAATTTGTTCAAAATTTTTACCTCAAGGGTTCAAATTATAACCTCTATGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCTCGAGTAGAGATCTTGAAGGTGACCAAAGACCTTGGCAACCCATGCATTTTAGCTGCCTATCAAGGTACATACACATACGGTGGGGAGGAGTACAAAGTGTCAGCCCCAGAGTCAGGGTCGAGCTTCGCCCGTTGCCGGAAGGTAATTCTCGAGGCATTGAAAATCAACAAATCATGTGGCTACAATGAATGCACTTTTGATGGTATATGGAGTGGCGGCGGAGGAGCCGGCCTCAACAATCTCTATGTTGCTTCCTTTTTCTTTGACAAGGCAGCTCAGGCTGGTTTCATAGATTCCAACAAACCAGATGCCATAGTGAAGCCCTTTGATTTCAAGAGAGCAGCAAGGATTGCCTGTCAAACTAAGTATGTTGATGCAAAGGCTAAATATCCTAATGTTTACTCAAGTGACTTGCAATTTGTGTGTTTGGATCTTGTTTACGAGTATGCCCTACTTGTCGATGGATTCGGTATTGATTCTAGAAAAAAGATCACATTGGTGAAGCAAGTGGCATATCAAGGTTCTCTTGCAGAGGCAGCATGGCCATTGGGCAATGCTGTAGCAATCCTCTCATCATCAAAGTACTCAACTGCAAATTATTGA 1401 45.32 MAATRPKRRNQLSISILLLLFSLSVLLSVSSGRETSSFINHRKIAAVGTSSSSTSNSSYAVILDAGSSGSRVHVFHFDGNMDLLFMGSEIEVFSQIKPGLSSYADDPKKAADSLIPLVEKAENAVPQKVQSVTPIRLGATAGLRFVEGDRSERILEAVRVVLKTRSRFKYEQDSVSILDGNQEGSYQWLTINYLLENLGKKYSKTVGVIDLGGGSVQMAYAISDEDAAKAPIASDGNTKFVQNFYLKGSNYNLYVHSYLRYGLQAARVEILKVTKDLGNPCILAAYQGTYTYGGEEYKVSAPESGSSFARCRKVILEALKINKSCGYNECTFDGIWSGGGGAGLNNLYVASFFFDKAAQAGFIDSNKPDAIVKPFDFKRAARIACQTKYVDAKAKYPNVYSSDLQFVCLDLVYEYALLVDGFGIDSRKKITLVKQVAYQGSLAEAAWPLGNAVAILSSSKYSTANY 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20785493 20798848 + CaPI482276_03g010980.1 Cam03g1098 123364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1098 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 178 193 IPR000407 GO:0016787(InterPro)
Cam03g1098 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 12 457 IPR000407 GO:0016787(InterPro)
Cam03g1098 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 53 461 IPR000407 GO:0016787(InterPro)
Cam03g1098 466 CDD NBD_sugar-kinase_HSP70_actin 61 220 - -
Cam03g1098 466 Gene3D - 59 452 - -
Cam03g1098 466 Gene3D Exopolyphosphatase. Domain 2 179 437 - -
Cam03g1098 466 FunFam Apyrase 1 179 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1098 Cam-Chr3:20785493 Cam04g0518 Cam-Chr4:18572312 3.10E-101 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1098 K14641 - mdm:103428652 510.375