Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1129 ATGAAAGCTTTCTTATTCCGTTGCCAATCGTCATATCAAAACTTTGCAAAAGCAGCCATAGCCAAAACCTTCATTTCCACCATTTTATTCATATCTTCCATTATTATTTATGTTATTAAGTTTTCTCAGTATTACCACAAAAGAAAGCCCTTAGTACGGCGGCTTCCACCAGGCCCAAAGCCATGGCCTCTCCTCGGCTGCCTTCCAGCAATGTTATTGAGGACCAAAAACTCGCCAACACACCAATGGATATATGGAATAATGAGGAAATTCAACACTGAAATTGCGTACATCCGTCTCGGATCAAATACTCACATAATCCCTGTGGCTTCTCCAGAACTCGCTCTTGAATTTCTAAAGACACACGATTTTGTCTTCGCATCACGACCCATTTCCATCACCGCTGAGATATTGAGCCACGGATTTCTTAGTACAGTTCTTTCACCGACGGGGGATCAATGGAAGAAGATGAGAAGAATCCTTGCTTCTCATGTTCTCAATCCATCGACCCTCCATCGAATGCTTGGCCAAAGATTAAAGGAAGCTGACACTCTTCTATGCTACATCTTCAAGCTCACTAGAAGGTGTGAAGCGATCAACATAAGAAGCATTACCCAACATTATTGCAGTAACATTATTAGAAGAATAATGTTCAATAGAAGATACTATGGGCAAGGCAAGGAAGATGGGGGACCATCTATTGAAGAAGAAGACCATAATCAAGCATTGCTTACGATTCTAACGCATCTTTATGCATTTTCTGTATCGGAAGTCATGCCTTGTTTAAAGCCATTTGATTTGGATGGACACCAGAAGATAGTGAAAAGGGCTTTGAAAGTCATAAGAAACCATGATGAACCAATAATAGAGGAAAGAGTGCAAGAATGGAGAGATGGGAGGAAAAAGGAAGTGGAGGACATTCTTGATATCTTGATCACTCTAAAAAATGAGAATGGTATATCGATGTTGTCAATCGAAGAAATTAAGGCTCAAGTCACGGAGCTGCAACTTGCAACCATAGATAATCCTTCAAATGCAGTGGAGTGGGCAATGGTAGAGTTACTCAATCAACCAAAAATTCTCCAAAGAGCTGTTGAAGAATTGGACAAAGTTGTTGGAAGAGATAGGTTGGTTCAAGAATTTGATATCCCTAATCTCAAGTATCTCACAGCTTGTATAAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCACGTTTCCAATTTTGACATTGTTGTGGGTGGCTATTTCATCCCAAAAGGTAGCCAAGTTTTGCTATGTCGTCTGGGTCTCGGCCGAAACCCAAGGATTTGGGAGGATCCAATGAGATTTGATCCAGAACGACATTTAAAAGATGGGACAGTTGAATTTGGAGTTTCAGAACCCAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGAGGTTGCATTGGTAGCTCACTTGGCACTAATATTACCATGATGCTATTTGCTAGACTTCTACAAGGATTTTCGTGGACTTTATTGCCAGGAATCACACAAATAGCCTTAACTGAAGCTGATGAACTCTCTCTTTCAAAACCATTGTATCTACATGCAAAGCCACGCTTATCTCATATCATGTATCCAACAACTTATTGA 1632 40.44 MKAFLFRCQSSYQNFAKAAIAKTFISTILFISSIIIYVIKFSQYYHKRKPLVRRLPPGPKPWPLLGCLPAMLLRTKNSPTHQWIYGIMRKFNTEIAYIRLGSNTHIIPVASPELALEFLKTHDFVFASRPISITAEILSHGFLSTVLSPTGDQWKKMRRILASHVLNPSTLHRMLGQRLKEADTLLCYIFKLTRRCEAINIRSITQHYCSNIIRRIMFNRRYYGQGKEDGGPSIEEEDHNQALLTILTHLYAFSVSEVMPCLKPFDLDGHQKIVKRALKVIRNHDEPIIEERVQEWRDGRKKEVEDILDILITLKNENGISMLSIEEIKAQVTELQLATIDNPSNAVEWAMVELLNQPKILQRAVEELDKVVGRDRLVQEFDIPNLKYLTACIRESFRLHPFSPFNVPHVSNFDIVVGGYFIPKGSQVLLCRLGLGRNPRIWEDPMRFDPERHLKDGTVEFGVSEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWTLLPGITQIALTEADELSLSKPLYLHAKPRLSHIMYPTTY 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21847399 21850457 - CaPI482276_03g011290.1 Cam03g1129 123395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1129 543 Gene3D Cytochrome P450 41 537 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 Pfam Cytochrome P450 56 518 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 32 536 IPR051382 -
Cam03g1129 543 SUPERFAMILY Cytochrome P450 56 533 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PRINTS E-class P450 group I signature 390 408 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PRINTS E-class P450 group I signature 114 135 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1129 543 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1129 Cam-Chr3:21847399 Cam03g1304 Cam-Chr3:26750785 1.50E-261 dispersed
Cam03g1129 Cam-Chr3:21847399 Cam01g1962 Cam-Chr1:32936424 2.20E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1129 - - - 0.0