Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1232 ATGGCTACTCAGGCACTTGTCTCATCTTCTTTAACCTCTTCAGTGGGTGCAGCCAGACAGAGATTAGGGGCAAAACCGTCTTTTGGATCTTCCAGAAAATCAGCTTCTTTTGTTGTTAGAGCTCAAGCCACTCCTCCTGTTAAGCAAGGAGCTGATAGACAACTATGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTCCCGGGCGATTACGGATTCGACCCATTGGGGCTATCAGACCCCGAAGGAACAGGAGGGTTTATCGAGCCAAGATGGTTGGCATACGGTGAGGTGATCAACGGGAGGTTCGCGATGTTGGGAGCAGCCGGAGCCATTGCCCCAGAGATCTTCGGATCCCTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGAACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTAGAAATGGCTCTAATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGTCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCCTAGAGAAGTTCTTGGGTGGGTCAGGGGACCCAGCTTACCCAGGTGGGCCCTTGTTCAACCCATTAGGGTTTGGGAAAGATGAGAAGTCATTGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGAAGGCTTGCAATGTTGGCAATATTGGGTTATTTTGTACAAGGTCTTGTCACTGGTGTTGGGCCTTACCAAAACCTTTTGGATCATTTGTCTGACCCAGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG 822 47.93 MATQALVSSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAQATPPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWSKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24693490 24695167 + CaPI482276_03g012320.1 Cam03g1232 123498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1232 273 Pfam Chlorophyll A-B binding protein 64 243 IPR022796 -
Cam03g1232 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 14 268 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cam03g1232 273 FunFam Chlorophyll a-b binding protein, chloroplastic 54 272 - -
Cam03g1232 273 SUPERFAMILY Chlorophyll a-b binding protein 52 269 - -
Cam03g1232 273 Gene3D Chlorophyll a/b binding protein domain 54 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1232 Cam-Chr3:24693490 Cam08g2067 Cam-Chr8:26202949 1.20E-44 dispersed
Cam03g1232 Cam-Chr3:24693490 Cam04g1248 Cam-Chr4:26466273 8.00E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1232 K08909 - csv:101202993 529.635