Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam03g1297 | ATGAAAGCTTTGTTAATCATTAGTCGATCATCATATCAAAACTATGCAAAAGCAGCCATAGCCATAAGCTTGGTTGCCATCATTTTATTCATATCTTCCATTATTTATGTTATTAGGTTTTCTCAATATTACCGCAAAAGAACTCCCTCGGTCCCGCGGCTTCCACCTGGCCCAAAGCCATGGCCTCTCCTCGGCTGCCTTCCAGCAATGTTGAGCAACAAAAACATGGCAACACACCAATGGATCCATGCAATTATGAATCAATTCAACACTGAAATTGCTTGCATCCGTCTCGGATCTAATAAGCACATAATCACTGTAACTTCTCCAGAACTCGCTCTTGAATTTTTAAAGACACACGATTCTGTCTTCGGATCACGACCCATTTCCACGGCTGCTGAAATAGTGAGCCACAGATATCTCAGTACAGTTCTTTCACCCATGGGGGATCAATGGAAGAAAATGAGAAGGATACTCGTTTCTCACGTTCTCAATTCTTCGACCCTCCATCAAATGCTTGGCCAAAGAACAAAGGAAGCTGATATTCTTTTACACTACATTTTCAACTTCTCTAAAACCGGTGAAGCCATCAACATAAAAAGCATTGTACGAAATTACTGCAGCAACATCATTAGAAGAATGATTTTCAATAGAAGATACTATGGGAAAGGTAGGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGACCATAATCAAGCGTTGTTGTCCATTCTTAGGCATGTTAATGCATTTTCTATATCTGATTTTATACCTTTTTTGAAGCCATTTGATTTAGATGGACATGAGAAGATAGTAAGAAGGGCTTTGAAAGTCATAAGGAGCCATGACGAACCCATTATAGAGGAAAGAGTGCAACAATGGAGAGATGGGAAGAAAAAGGATGTGGAGGACATTCTAGATATCCTTATCTCACTGAAAAATGAGAATGGTAAATCGTTGTTGTCAGTCGAAGAGATTAAAGCTCAAGTTACGGATCTACAACTTGCAAGCATAGATAATCCTTCAAATGCAGTAGAATGGGCAATGGCAGAGTTACTTAATCAACCAAAAATTCTCCAAAAAGCTATTAAAGAATTGGACAAAGTAATTGGAAGAGATAGACTGGTTCAAGAGTTTGATGTACCTAATCTCAAGTATCTTGCAGCTTGTATTAGAGAATCTTTTAGACTTCATCCATTTTCACCCTTCAATGTTCCTCACGTTTCCAACTCTGACACTATTGTGGCTGGCTACTTCATCCCTAAAGGTAGCCAAGTATTGCTAAGTCGTCTTGGTCTTGGTCGAAACCCAAGAATTTGGGAGGATCCATTGAGATTTGATCCAAAACGTCATTTAAAAAATGGAATAGCTGAATTGGGAATTTCAGAACCCAATCTTCGATTCGTGACCTTCACTAGAGGGAGGAGAGGATGCATTGGTACCTCACTTGGCACTAACATTACCATAATGTTATTTGCTAGACTTCTACAAGGATTTTCTTGGAGCTTATTGCCCGGAATAACAAAGATAGATTTATGTAAAACCGATGAACTCTCTCTTTCAAAGCCATTATATCTGCATGCAAAACCACGTTTATCTCCTATTATGTATCCAACTTATTGA | 1623 | 39.06 | MKALLIISRSSYQNYAKAAIAISLVAIILFISSIIYVIRFSQYYRKRTPSVPRLPPGPKPWPLLGCLPAMLSNKNMATHQWIHAIMNQFNTEIACIRLGSNKHIITVTSPELALEFLKTHDSVFGSRPISTAAEIVSHRYLSTVLSPMGDQWKKMRRILVSHVLNSSTLHQMLGQRTKEADILLHYIFNFSKTGEAINIKSIVRNYCSNIIRRMIFNRRYYGKGREDGGPTFEEEDHNQALLSILRHVNAFSISDFIPFLKPFDLDGHEKIVRRALKVIRSHDEPIIEERVQQWRDGKKKDVEDILDILISLKNENGKSLLSVEEIKAQVTDLQLASIDNPSNAVEWAMAELLNQPKILQKAIKELDKVIGRDRLVQEFDVPNLKYLAACIRESFRLHPFSPFNVPHVSNSDTIVAGYFIPKGSQVLLSRLGLGRNPRIWEDPLRFDPKRHLKNGIAELGISEPNLRFVTFTRGRRGCIGTSLGTNITIMLFARLLQGFSWSLLPGITKIDLCKTDELSLSKPLYLHAKPRLSPIMYPTY | 540 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 26607331 | 26609568 | + | CaPI482276_03g012970.1 | Cam03g1297 | 123563 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam03g1297 | 540 | SUPERFAMILY | Cytochrome P450 | 55 | 531 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 345 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 388 | 406 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 325 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 429 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 112 | 133 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | Pfam | Cytochrome P450 | 55 | 523 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | Gene3D | Cytochrome P450 | 40 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g1297 | 540 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 30 | 534 | IPR051382 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam03g1297 | Cam-Chr3:26607331 | Cam03g1304 | Cam-Chr3:26750785 | 6.30E-247 | dispersed | |
| Cam03g1295 | Cam-Chr3:26576756 | Cam03g1297 | Cam-Chr3:26607331 | 2.40E-100 | proximal | |
| Cam03g1296 | Cam-Chr3:26578042 | Cam03g1297 | Cam-Chr3:26607331 | 3.60E-60 | tandem | |
| Cam03g1297 | Cam-Chr3:26607331 | Cam03g1298 | Cam-Chr3:26614759 | 1.10E-214 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam03g1297 | - | - | - | 0.0 |