Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1301 ATGGAAGCTGCTCTCTTATTCATTAGTCAATTGGCACACCATTATTCCCTGATAGACATATCCAAAATTGTCATTGTGTTTGTATTTATGGCTTTCATTTTTGTTATGTTTTCCCAACATTGTAACCTCAAAAGAAAACGCAGAGTCCGACAACCACCTTTCCCACCAGGCCCAAAGCCATGGCCTATTGTTGGGTGCCTCCCATCAATGTTGTTGAGGAAAAATTCCCCAGCACATCAATGGATTCATTCAGTAATGAAGCAATTCAATACTGAAATTGCTTTCATACCCCTTGGAAATACTTACATAATTCCCGTGACTTCTCCAGAACTAGCTCTTGAATTTCTTAAGACATATGATTCTATCTTTGCATCACGTTCCTCCATTTCCAACACTGTTCATATCTTAAGCAATGGATATGTCACCACAGTTTTTGCATCGATAGGAGACCAATGGAAGAAGATGAGAAGAATTCTTGCATCACAAATTCTCAATCCTTCAACTCTCCATCGATTGCTTGGTCATAGAATCACCGAGGCCGATACTCTTTTACGCTATATTTTCACCCAAACGCGTGATAATGGAGGAGGTGCAACCATAAATGTTAGAAGTATAACACAACATTATTGTGGTAACATTATTAGAAGAATGCTATTCAACAGAAGGTACTATGGCAAAGGGAGGGAAGATGGAGGACCAACTTTTGAAGAAGAAGAGCACAATCAAGCATTGTTAACAATTCTTACATATGTTCATGCATTTTCTATATCAGATTTCATACCTTGTTTGAAGCCTTTTGATTTAGATGGACATGAAAAAATTATGAAGAAGGCTTTGAATGTCCTCCGAAAGTATGACGAACCCATTATTGATGAGAGAGTACAAAGATGGAAATCAGATGAGAAAATGGAAGGGGTGACGAACGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATAAAAAATCATTATTGTCAGTCGAAGAGATTAAGGCTCAAATCACGGAGTTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGGCTATGGCAGAGTTGATCAATAAACCAAAAATTCTTGAAAAAGCCGTTGAGGAATTAGACAAAGTAGTTGGAAGAGAAAGGTTAGTTCAAGAATCTGATATCCCAAAACTCAAATATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAACGTTCCTCACGTTTCCACCTCTGACACCGTTGTGGCCGGTTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTCAGTCGTTTAGGTCTTGGTCGAAACCCAAGGATTTGGGAGGATCCAATGACATTTGATCCAGAACGTCATCTAAAAGATGGGTCAATTGAATTGGGAATTTCAGAACCTGATCTACGATTCATCACCTTTACTAGAGGGAGAAGAAGTTGCATTGGTAGCTCACTTGGGACTAACATTACAATGATGCTATTTGCTAGACTTCTACAAGGGTTTTCATGGAGCTTATTGCCAGGAGTCACAAAGATAGACTTCTCTGAAACAGATGAACGCACTCTCCCAAAGCCATTGCATCTATATGCAGAACCACGCTTATCTTATATTATGTATCCAACTTATTGA 1638 38.64 MEAALLFISQLAHHYSLIDISKIVIVFVFMAFIFVMFSQHCNLKRKRRVRQPPFPPGPKPWPIVGCLPSMLLRKNSPAHQWIHSVMKQFNTEIAFIPLGNTYIIPVTSPELALEFLKTYDSIFASRSSISNTVHILSNGYVTTVFASIGDQWKKMRRILASQILNPSTLHRLLGHRITEADTLLRYIFTQTRDNGGGATINVRSITQHYCGNIIRRMLFNRRYYGKGREDGGPTFEEEEHNQALLTILTYVHAFSISDFIPCLKPFDLDGHEKIMKKALNVLRKYDEPIIDERVQRWKSDEKMEGVTNDILDILISLKDENKKSLLSVEEIKAQITELQIATIDNPSNAVEWAMAELINKPKILEKAVEELDKVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHVSTSDTVVAGYFIPKGSEVLLSRLGLGRNPRIWEDPMTFDPERHLKDGSIELGISEPDLRFITFTRGRRSCIGSSLGTNITMMLFARLLQGFSWSLLPGVTKIDFSETDERTLPKPLHLYAEPRLSYIMYPTY 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26673660 26675416 + CaPI482276_03g013010.1 Cam03g1301 123567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1301 545 SUPERFAMILY Cytochrome P450 55 536 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 26 538 IPR051382 -
Cam03g1301 545 Gene3D Cytochrome P450 47 539 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 Pfam Cytochrome P450 55 527 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1301 545 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1298 Cam-Chr3:26614759 Cam03g1301 Cam-Chr3:26673660 1.80E-254 dispersed
Cam03g1299 Cam-Chr3:26642494 Cam03g1301 Cam-Chr3:26673660 1.00E-222 dispersed
Cam03g1301 Cam-Chr3:26673660 Cam03g1305 Cam-Chr3:26776553 5.60E-227 dispersed
Cam03g1301 Cam-Chr3:26673660 Cam03g1303 Cam-Chr3:26738108 9.20E-198 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1301 - - - 0.0