Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1303 ATGGAAGTTGCTTTCTTATTCTTTAGTCAATTGGCACACCAAAACTCTTCAATAGCCATATCCGAAACTTTCATTGTGTTTGTATTTATGGCTTTCATTTCTATCATATTTTTCCAATGTTATAACCTCCAAAGAAAACACTCAGTCGGACGACAACCACCTCTCCCACCAGGCCCAAAGCCATGGCCACTCGTAGGTTGCCTTCCAACATTGTTAACCAACAAAACCCCAGCACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATAGCTTCCATACGCCTTGGAAATACTTACATAATCCCTGTCACTTCTCCACAACTCGCTCTTCAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTCCTCTATTTCTAACGCTGTTGATATCTTAACCCGTGGATATCTCACCACAGCATTTTCACCGATGGGAGAGCAATGGAAGAAGATGAGAAGAATTATGGCATCACAAGTACTTAATCCGACCACACTTCATCGAATGATTGGCCAAAGAACCGCCGAAGCTGATATTCTTTTACGCTATATTTTCACCCAAACTAGTAATAATAGAGGAGGTGCAGTGATTAATATTAGAAGCATAACACAACATTATTGTGGTAATATTATCAGAAGAATGCTTTTCAACAAAAGGTATTATGGTAAAGGGAGGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGACCATAATCAAGCATTGTTGACCATTGTTAGGCATGTTAATGCATTTTCTATATCAGATTTCATACCTTGTTTGAAGCCTTTTGATTTAGATGGACATGAAAAAATTGTGAAGAAGGCTTTAAGTGTCATTCAAAAATATGATGAGCCCATTGTAGATGAGAGAGTGCAAGAATGGAAGAAATATGAGAAAAAAGAAGGGATAGAGTACATTCTTGATATCCTCATTTCACTTCAAGATGAGAATGGAAAATCGTTGTTGTCAGTCGAAGAGATTAAAGCTCAAATTGCGGAGCTACAAATTGCAACGATAGATAATCCTTCAAATGCAGTGGAATGGGCAATGGCAGAAATGATGAATCAACCAAAAATTTTCCAGAAAGCCGTTGAAGAACTGGACGAAGTAGTTGGAAGAGAAAGGCTAGTTCAAGAATCAGATATCCCAAAACTCAAGTATCTCACTGCTTGCATTAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATATTCCTCATGTTTCAAACTCTAACATTATTGTGGATGGTTACTTTATTCCCAAAGGTAGTCAAGTCTTACTTAGTTGTCCAGGTCTTGGTTGA 1317 37.97 MEVAFLFFSQLAHQNSSIAISETFIVFVFMAFISIIFFQCYNLQRKHSVGRQPPLPPGPKPWPLVGCLPTLLTNKTPAHQWIHSVMKQFNTEIASIRLGNTYIIPVTSPQLALQFLKTYDSVFASRSSISNAVDILTRGYLTTAFSPMGEQWKKMRRIMASQVLNPTTLHRMIGQRTAEADILLRYIFTQTSNNRGGAVINIRSITQHYCGNIIRRMLFNKRYYGKGREDGGPTFEEEDHNQALLTIVRHVNAFSISDFIPCLKPFDLDGHEKIVKKALSVIQKYDEPIVDERVQEWKKYEKKEGIEYILDILISLQDENGKSLLSVEEIKAQIAELQIATIDNPSNAVEWAMAEMMNQPKIFQKAVEELDEVVGRERLVQESDIPKLKYLTACIRESFRLHPFSPFNIPHVSNSNIIVDGYFIPKGSQVLLSCPGLG 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26738108 26743059 + CaPI482276_03g013030.1 Cam03g1303 123569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1303 438 Gene3D Cytochrome P450 50 438 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1303 438 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1303 438 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1303 438 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1303 438 Pfam Cytochrome P450 56 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1303 438 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 26 438 IPR051382 -
Cam03g1303 438 SUPERFAMILY Cytochrome P450 56 434 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1303 Cam-Chr3:26738108 Cam03g1305 Cam-Chr3:26776553 7.70E-171 dispersed
Cam03g1301 Cam-Chr3:26673660 Cam03g1303 Cam-Chr3:26738108 9.20E-198 proximal
Cam03g1303 Cam-Chr3:26738108 Cam03g1304 Cam-Chr3:26750785 3.30E-169 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1303 - - - 0.0