Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1360 ATGGAGAATCTTATGATGGTTGATGATGCTTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGATAATATTGCAGAGAAAGATGTTAGTGATGAAGAAATTGATGCAGAGGATCTGGAGAGGCGTATGTGGAAAGATAGGATCAAGCTTAAAAGGATTAAGGAAAGAGAGAAAATTGCTGCACAACAGGCTGCGGAGAAGCAGAAACCGAAGCAGACATCTGACCAGGCTCGAAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAATATATGCTGAAACTGATGGAAGTATGCAAAGCTCGGGGATTCGTATATGGCATTATACCTGAGAAGGGGAAACCAGTTAGTGGTGCTTCTGACAACATCCGAGCTTGGTGGAAAGAAAAAGTTAAATTTGACAAGAATGGACCAGCTGCTATAGCCAAGTATGAAGCAGAATGTCTTGCCAAAGGAGAGGCAGATGGAAATGGAAACGGTAACTCCCAGAGCGTTCTTCAAGACCTTCAGGATGCAACGCTCGGGTCTCTTTTGTCTTCTTTGATGCAACATTGCGATCCCCCTCAGCGGAAGTACCCATTAGAAAAGGGGGTTCCTCCACCCTGGTGGCCCTCTGGGAATGAAGATTGGTGGGTAAAGCTTGGACTATCCCATGGCAATAGTCCTCCTTATAAGAAGCCACACGATTTGAAGAAGATGTGGAAAGTGGGGGTCTTAACAGCTGTAATAAAGCATATGTCACCTGATATTGCAAAGATAAGGAGGCATGTACGGCAGTCGAAGTGCTTACAAGACAAGATGACTGCAAAGGAGAGTGCAATTTGGTTAGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGGCAACCGAGCAGTGATAATGGAGCTTCTGGAATAACAGAGACACCAGTAGGTGGTCGTGGTGAAAAGCAAGCTGCAGTAAGCAGTGAAAGTGACTATGATGTTGACCTTGCTGATGATGGTGTCGGGTCAGTTTCTTCTAAAGAGGACAGAAGACCACGATCCATGGATGTGGAGCCACCCAGTAATCTACCCAATAATGCTCCTCAACCTGCTGAAGGAAAGGAGCAAGGTGAAAAACAAAGGAGAAAAAGGCATCGTGGGGGCAGGACAAAGCCTATCGATCAGACACTGGCTCCCTCTCGAAACGAAGAAGAACCATGTGTCGAACCAAGAACTACTCAGCTCGATATTAACCATTCTAATGTACCATTAGATAGATTTGAAATTCCAGGAAACCAACAACAAAAGGATACTGTCACAGCTTTGAGGCCACTCGAGAAGGATTTGGATGTCCAATCAGAAGTACCAGCTCCTCCGTTCAACATGCTCTCCGTGCCATCCTCTGATAATATCAATATAATTTCCACTCAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCTGTAATGCAGAATCCTGAGGTGCAACATGAAAGTGCTTACAATATTTATAATCCAGCGGTCGATTATAGATCCAATTTTGATATGCAGCATTCTCAATTTGTTAATGAGCCTCAAATGAGATTGGAGGAAGGATTACATATTCCGACACAACATAGAAACGATGGGACGGTAGGAGAAGAATTCAACTATGTAAAAGAAACGTTCAACACAGAACAAGATCGGCCTGTTGATGCACAGTTTGGATCACCAATCAACAGTCTATCATTAGATTATGGAGCATTTAACAGTCCGTTCCATCTCGGGATCGACAGTTCAACCTCATTCGATGACTTGTTGGTTGATGACGATTTGATTCAATACTTCGGAGCATAA 1812 43.6 MENLMMVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIDAEDLERRMWKDRIKLKRIKEREKIAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAKGEADGNGNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLSHGNSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASGITETPVGGRGEKQAAVSSESDYDVDLADDGVGSVSSKEDRRPRSMDVEPPSNLPNNAPQPAEGKEQGEKQRRKRHRGGRTKPIDQTLAPSRNEEEPCVEPRTTQLDINHSNVPLDRFEIPGNQQQKDTVTALRPLEKDLDVQSEVPAPPFNMLSVPSSDNINIISTQSMYVDGRPLLYPVMQNPEVQHESAYNIYNPAVDYRSNFDMQHSQFVNEPQMRLEEGLHIPTQHRNDGTVGEEFNYVKETFNTEQDRPVDAQFGSPINSLSLDYGAFNSPFHLGIDSSTSFDDLLVDDDLIQYFGA 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27709636 27711447 - CaPI482276_03g013600.1 Cam03g1360 123626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1360 603 Pfam Ethylene insensitive 3, DNA-binding domain 40 287 IPR047091 GO:0003700(InterPro)
Cam03g1360 603 MobiDBLite consensus disorder prediction 62 85 - -
Cam03g1360 603 MobiDBLite consensus disorder prediction 333 347 - -
Cam03g1360 603 FunFam Ethylene insensitive 3-like 1 74 152 - -
Cam03g1360 603 Gene3D - 160 298 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cam03g1360 603 Gene3D - 74 152 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cam03g1360 603 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 566 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
Cam03g1360 603 Coils Coil 39 59 - -
Cam03g1360 603 MobiDBLite consensus disorder prediction 289 402 - -
Cam03g1360 603 SUPERFAMILY DNA-binding domain of EIN3-like 168 290 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cam03g1360 603 FunFam Ethylene insensitive 3-like 1 161 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1360 Cam-Chr3:27709636 Cam08g1308 Cam-Chr8:19379900 4.40E-100 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51689 PF04873 EIN3 4.10E-127 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1360 K14514 - csv:101210347 1091.26