Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1410 ATGGGTGGTTCCGAAGGACCTTTGGACTTTGTCGGGGCTGTGAAGAAGGAAATAGGAAGGGGTGAAGTGGTAGCAGTGTTGGTTGAAAGGCTGAGGGCTGAGGTTAAGTGGAATCAGATTGAGAAGTTGCTGATAATTACTAAGCACTTCAAGCTTCTTCTATTTCCTTACATACAAGATTCTATATTTTCTTTGCCTGTAGTCTGTGAGCATGCATATTCACTTGCGCAAAACCTGGATCCTAATAGTGAAGGAAGAGGTGTTTTGCAATCCAAAACTGGTTTGATGTCTGTCATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAACCGTAGATAGAAGCCAGGACATTACTCGGTTACAGGAGTTCTACAAACTATACCGAGAGAAGAATAATGTAGATAAGCTTTGGGAAGGTGAAATGAAATTTAGGGAATCTGGTGCTTTCAGTGGTAATCTTGGAAAGTTGGAACGGAAAACGTTAAAGCGAAACAAAGTCTTTGCAACCCTGAAAGTATTAGCAATGGTACTGGAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATTGGATGCAGCAATGACAGAGGACCTAATTGCGTATAATATTATTCCATTAGATGCTCCTTCTGTGACAAATGCTATTGGGTCCTTGACTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCCGCAGAATTTTCCATTCCGGAGACCAGGAGTCCTGACATGCTTGACTTTCTACACTTCGTTTTTGGATTTCAGGATCCTTGGAGAGAAATTGCATCTTTAAGAAAGATTGGCCTTGTGAGCATTTCTTGGGGGATATGGAGAAGGATTTACGGTCAAAAGAAAAGGAGCGAGTTTTCTTCCCAGCCCTCGGTGGTAGGAAGAGGTTCAAGCAAGCAGTGGCAGTTAATCATGGTGGGGCTAGGCTGTGAAGACAATGTGTCTAATCAGCGTGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGACTTCGTATACTTGAAGAAACTGAACCAAAATTGGATGCAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGTTTGTCTGCTGTTGGCAAGGAAAAGAAGCTATTATTTATTTCCTTATACTTTCTTATATGGGGGGAAGCATCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCAT 1278 42.25 MGGSEGPLDFVGAVKKEIGRGEVVAVLVERLRAEVKWNQIEKLLIITKHFKLLLFPYIQDSIFSLPVVCEHAYSLAQNLDPNSEGRGVLQSKTGLMSVIKQKLAKREGGTVDRSQDITRLQEFYKLYREKNNVDKLWEGEMKFRESGAFSGNLGKLERKTLKRNKVFATLKVLAMVLEQLSDAIPEEMKRLMELDAAMTEDLIAYNIIPLDAPSVTNAIGSLTEVQAAVSALKYFSGLPKLPAEFSIPETRSPDMLDFLHFVFGFQDPWREIASLRKIGLVSISWGIWRRIYGQKKRSEFSSQPSVVGRGSSKQWQLIMVGLGCEDNVSNQREHVVHLLANEQSRLRILEETEPKLDAAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSAVGKEKKLLFISLYFLIWGEASNVRFLPECLCYIFHH 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28700618 28719996 + CaPI482276_03g014100.1 Cam03g1410 123676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1410 426 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 58 426 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cam03g1410 426 SMART FKS1_dom1_2 394 426 IPR026899 -
Cam03g1410 426 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 396 426 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1410 Cam-Chr3:28700618 Cam03g1419 Cam-Chr3:28828612 8.40E-122 dispersed
Cam03g1408 Cam-Chr3:28622288 Cam03g1410 Cam-Chr3:28700618 1.90E-149 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1410 K11000 - csv:101216435 349.362