Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam03g1412 | ATGGTGCTTTGGCCGTGGCATGATATGCTTGGTAGAAGTCGCCATCAAGGGAAAACGTCATTTGTTGAGCATCGGACTTTTCTTCATCTTTATCATAGTTTCCATCGCTTATGGATATTTTTGGTCATGACGTTTCAGGCTCTGACCATTGTTGCATTTAACAATGGAAGCTTTAATATGAAGACACTGCTGGAAGTTCTGAGTCTTGGTCCGACATTTATTGTAATGAAGTTGATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATACTCTACTTCATGGCGTCTTTTTGTTTCTCGAATTCTTCGTTTTCTTTGGTTTAGTACTGCATCAGCTTCGACAACATTTCTTTATGCGAAAGCTCTTCAGGAGGGGAGTAAACCAAATGCAGAAAGAGTGATGTTCAGACTATATGTAATTGTGATTGGAATATATGGTGGTGTACAGCTTTGTCTCAATATCCTCATGCATATACCTGCTTGCCGTCTTTTAACAAATCAATGTGATTGGTGGCCTCTTGTTCGCTTTTTCAAGTGGATGCGTCAGGAACGTTACTATGTTGGACGTGGGATGTATGAGAGGACTATTGACTTTATCAAGCTCTGGATATTGATGAGAATATTAGCACATCTGACAACCAAAAGGCTTGGTTAG | 660 | 40.0 | MVLWPWHDMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMTFQALTIVAFNNGSFNMKTLLEVLSLGPTFIVMKLIESVLDILMMYGAYSTSWRLFVSRILRFLWFSTASASTTFLYAKALQEGSKPNAERVMFRLYVIVIGIYGGVQLCLNILMHIPACRLLTNQCDWWPLVRFFKWMRQERYYVGRGMYERTIDFIKLWILMRILAHLTTKRLG | 219 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 28732790 | 28735479 | + | CaPI482276_03g014120.1 | Cam03g1412 | 123678 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam03g1412 | 219 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 13 | 206 | - | GO:0005886(PANTHER)|GO:0046527(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam03g1412 | Cam-Chr3:28732790 | Cam03g1419 | Cam-Chr3:28828612 | 3.10E-96 | dispersed | |
| Cam03g1408 | Cam-Chr3:28622288 | Cam03g1412 | Cam-Chr3:28732790 | 8.30E-97 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam03g1412 | K11000 | - | csv:101216435 | 365.925 |