Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1414 ATGATTTCTGAACATCTTTCCCCTAAGGCTTGTTTGGTCGATGATGAAAATGTGATACTAGACTCGTCTTTGCCAACAACTTATGATAATGGCCAAACGATGCATTCGTTAAGCCACCCAGATGAACATCTACGTATCCACAGACGGGCGATTAGATCATTGGAAGCCGTACATAAACTGTTCAAGCAGTTTCCTAGAGCTTTCATGGACACTCTACATGTTCCTCTCCAAGATAGGCTTGGGTTTTCGAATCAGTCATCAAGTGAGGCCTATAACAATCTACTGAGGCTTTCCGGGACATTATACTACTTATCGGGGCAACTCAGGCAAATACCGTGTCAACGGGGACTATCGAGCCCCACAGATGCTTCTGGATGGTATCCCGAGTGTCGGGACGACATCAGCTTTCTCTTTCCTGCTCGGGTCGGCTTATCGAGAACCATCATAATCACCCCATGGGCTGTTGAGAAAGACAAGTTCGATGCTGCTCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAACTTGGAAATGGAGTTACTTCAAATGCCTGAAAACAAGGGTAATCTTCCCATGGTTCAGTGGCCACTTTTTCTTCTTGTCAGCAAGATATTTCTAGCTAAGGATATTGCTGTTAAAAGACGAAATTCACAAGACAAGTTGTGGAAGCATATTTCAAGAGATGACTATATGAAATATGCAGTACAGGAATGTTACCACGCCATTAAGCTTATCTTAACGGAATTACTAGTTGGGGAAGGAAGGATGTGGGTTGAAAGGTTATTTGAAGACATTCAAGCTAGTATAGCAAACAATTCGATTCTAAATGACTTCCAGCTAAATAAGCTGCCTCTTGTGATTACAAGAGTAACTGCTCTAACGAGTATTCTGAAAGAACCAGAAACTTCGGAGCTGGAAACAGGGGTTGTTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACCATGATATCCTTTTCGGTGACAAGAGGGGGCACTATGAAACATGGAACATATTAGTAAAAGCCAGAAATGAAGGTCGCTTGTTTACAAAATTAAATTGGCCTAAAGATCCAGAATTGAAGTCCCAAGTCAAAAGATTGCATTCCTTGTTAACCATTAAAGATTCGGCTTCAAATATTCCAGTTAATCTTGAGGCCAGACGGAGACTGCAATTCTTTACGAATTCACTTTTCATGGAGATGCCAACTCCAAAACCTGTTCGTCAGATGCTTTCCTTCAGTGTATTCACCCCATATTATTCTGAGACGGTGCTCTATAGTATGGAGGAACTATTGAAGAAAAATGAGGATGGGATAATAACCTTGTTTTACTTGCAAAAAATTTATCCAGAAGTTTTGTGTTGTACTTTGGTATTGGGTTCTGCCACCTTGGTGTTTGGGCTATATTCTGATTCAGATGAGTGGAAGAACTTTCTTGCTCGAATTGGTCGAGATGAGAATGAAGTTGACCCAGAATCATTTGATAACCCTAATGACATCCTTGCACTACGATTTTGGGCCTCTTATAGGGGACAGACTTTAGCAAGAACAGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAGAGAGGAACTTATGGAGATTTGGAAGCTGCCATTCCTTGTACCGATGCTACTGATACTCGGGGTTTTGATTTATCTCCGGAAGCACATGCATTGGCAGATCTTAAATTTACATATGTTGTGACGTGTCAGATATATGGCAAACAAAGAGAACAACAAAAACCTGAGGCCGCTGACATTGCATTGCTTATGCAAAGAAATGAAGCCCTTCGTGTTGCCTACATCGATGATATTGAAACCCTAAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTTGTAAAGGCTGATATCGATGGAAAAGATAAGGAGATATATTCAATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAATCATGCTATTGTTTTTACTCGTGGAAATACTATTCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAAATGAGAAATCTGCTTGAGGAATTTGGTCGTGATCATGGTATTCGTCCTCCTACCATACTAGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATGTCTTGCTTCATTCATGTCAAATCAAGAAGCTAGTTTTGTGACTTTTTGCCAGCGTGTTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGGGTTTTTCATCTAACACGAGGTGGCATCAGCAAGGCCTCCCGTGTTATCAACATTAGTGAAGATGTCTTTGCAGGATTTAATTCAACATTGAGGCAAGGGAACGTTACTCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAACCAGATTACTCTTTTTGAAAGAAAGCTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGTGATGTATATTGGCTAGGCCAACTGTTCGATTTTTTCCGGATGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACTATGTTAACGATGCTAACTGTATACATTTTTCTCTATGGAAAAGCATATTTGGCACTATTTGGAGTTGGTGAGACCATTGAAGATAGAGCTAACATTACAGATATTATGGCATTGTCAACTGCTTTGAATGGACAGTTCCTCATCCAAATTGGTATCTGCTCTGCTGTACCGATCTTGGGATTCATATTGGAGCAAGGTTTCTTCAAGACTATTGTCGACTTCATAACCATGCAGCTTCAGCTTTGTTCTATCTTCTTCACATTCTCTCTTTGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGCGGTGCAAAGTATCATGCAACCGGAAGGGGATTTGTGGTTCACCATATCAAATTCTCTGAAAATTACAGATTGTACTCCCGCAGCCATTTTGTTAAAGGATTTGAAGTTGTGCTTCTGTTGGTTGTATACATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTAACTCTTAACACTTGGTTAATGGCAATATCTTGGCTTTTTGCTCCCTATCTGTTCAATCCATCTGGGTTTGAGTGGCAGAAGACTGTGGAGGATTTCAAGGAATGGACCAATTGGCTCTTTCATCGAGGTGGAGTTGGTGTTAAGGGTGAAGAAAGTTGGGAATCGTGGTGGGACTCAGAACTGGCACATATAAAAACCATTGAAGGGCGGATAGCAGAGACAATTTTAAATCTAAGATTTTTTATTTTTCAATATGGAATAGTTTATAAGCTCCATACCCAAGGATCAAACACATCATTGTCGGTACATGGGTTCTCCTGGATTGTGTTAGCTTGCCTTATAGTTCTGTACAAGGTGTTTACCTTCAGCCAGAAGATGACTGTCAATTTTCAGCTTTTGTTGCGATTTATCCAAGGTCTTTCTTTCCTTTTGACGCTGGCTGGCCTGGCAGTTGTGGTTGCTATTATGGATTTGTCAATGCCTGATGTATTTGCTTGCATCTTGGCATTTGTACCTACAGGATGGGGCATTCTTTCTATTGCAGTAGCTTGGAAATCTTTAATAAAGAAACTGGGACTCTGGAAATCCATATGCTCAATTGCTCAGTTGTACGATGCCGGGATGGGGATGCTCATCTTTATCCCCATTGCATTCCTTTCATGGTTTCCATTTGTATCGACATTCCAAAATTGTCTTATGTTCAACCATGCTTTCAATTGA 3810 40.45 MISEHLSPKACLVDDENVILDSSLPTTYDNGQTMHSLSHPDEHLRIHRRAIRSLEAVHKLFKQFPRAFMDTLHVPLQDRLGFSNQSSSEAYNNLLRLSGTLYYLSGQLRQIPCQRGLSSPTDASGWYPECRDDISFLFPARVGLSRTIIITPWAVEKDKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPENKGNLPMVQWPLFLLVSKIFLAKDIAVKRRNSQDKLWKHISRDDYMKYAVQECYHAIKLILTELLVGEGRMWVERLFEDIQASIANNSILNDFQLNKLPLVITRVTALTSILKEPETSELETGVVKAVQDLYDVVHHDILFGDKRGHYETWNILVKARNEGRLFTKLNWPKDPELKSQVKRLHSLLTIKDSASNIPVNLEARRRLQFFTNSLFMEMPTPKPVRQMLSFSVFTPYYSETVLYSMEELLKKNEDGIITLFYLQKIYPEVLCCTLVLGSATLVFGLYSDSDEWKNFLARIGRDENEVDPESFDNPNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGTYGDLEAAIPCTDATDTRGFDLSPEAHALADLKFTYVVTCQIYGKQREQQKPEAADIALLMQRNEALRVAYIDDIETLKDGKVHKEFYSKLVKADIDGKDKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNTIQTIDMNQDNYFEEALKMRNLLEEFGRDHGIRPPTILGVREHVFTGSVSCLASFMSNQEASFVTFCQRVLANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDVFAGFNSTLRQGNVTHHEYIQVGKGRDVGLNQITLFERKLAGGNGEQVLSRDVYWLGQLFDFFRMMSFYFTTVGYYFCTMLTMLTVYIFLYGKAYLALFGVGETIEDRANITDIMALSTALNGQFLIQIGICSAVPILGFILEQGFFKTIVDFITMQLQLCSIFFTFSLCTKTHYFGRTILHGGAKYHATGRGFVVHHIKFSENYRLYSRSHFVKGFEVVLLLVVYMAYGYSSGGSLAYILVTLNTWLMAISWLFAPYLFNPSGFEWQKTVEDFKEWTNWLFHRGGVGVKGEESWESWWDSELAHIKTIEGRIAETILNLRFFIFQYGIVYKLHTQGSNTSLSVHGFSWIVLACLIVLYKVFTFSQKMTVNFQLLLRFIQGLSFLLTLAGLAVVVAIMDLSMPDVFACILAFVPTGWGILSIAVAWKSLIKKLGLWKSICSIAQLYDAGMGMLIFIPIAFLSWFPFVSTFQNCLMFNHAFN 1269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28770165 28796670 + CaPI482276_03g014140.1 Cam03g1414 123680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1414 1269 Pfam 1,3-beta-glucan synthase component 389 1106 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cam03g1414 1269 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 50 1268 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1414 Cam-Chr3:28770165 Cam06g1915 Cam-Chr6:30084644 0.00E+00 dispersed
Cam03g1414 Cam-Chr3:28770165 Cam03g1419 Cam-Chr3:28828612 9.70E-190 proximal
Cam03g1414 Cam-Chr3:28770165 Cam03g1420 Cam-Chr3:28887997 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1414 K11000 - csv:101216435 1992.62