Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1420 ATGTATAGATTAAGTTGCAGGAGATTTTTTGCAGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAGAGAGGAACTTATGGAGACTTCAAAGCTGCCATTCCTTGTACTGATGCTACTGATACTCGGGGTTTCGATTTATCTCCTGAAGCACGTGCACTAGCAGATCTTAAATTTACATATGTTGTGACATGTCAGATATATGGCAGACAAAGAGAACAACAAAAACCAGAGGCCGCTGACATTGCATTGCTTATGCAAAGAAATGAAGCCCTTCGTGTTGCCTACATCGATGATATTGAAACCCTGAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTTGTAAAGGCTGATATCAATGGAAAAGATAAGGAGATATATTCAATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAACCATGCTATTGTTTTTACTCGTGGAAATGCTATTCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTTGAGGAATTTGATCATGATCATGGTATTCGTCCTCCTACCATACTAGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATCTCTTGCTTCATTCATGTCAAATCAAGAAGCTACTTTTGTGACTCTTGGTCAACGTATTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGAGTTTTTCATCTAACACGAGGTGGCATCAGCAAGGCCTCCCGTGTTATCAACATAAGTGAAGATGTCTTTGCAGGATTTAATACAACATTGAGGCAAGGGAACGTTACTCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAACCAGATTACTCTTTTCGAAAGAAAGGTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGAGATGTATACAGGCTTGGCCAACTGTTTGATTTTTTCCGGACGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACTATGTTAACAGTGCTAACTGTATACATTTTTCTCTATGGAAAAGCATATTTGGCACTATTTGGAGTTGGTGAGACCATTGAAGATAGAGCTAATATTGCAAATATTATCACATTGTCAACTACTTTGAATACACAGTTCCTCATCCAAATTGGTATTTGCACTGTCGTGCCGATCTTAGGATTCATATCAGAGCAAGGTTTCTTCAAGACTATTGTCAGCTTCATAACCATGCAGCTTCAGCTTTGTTCTATCTTCTTCACATTCTCTCTTTGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGCGGTGCAAAGTATCAAGCAACTGGAAGGGGATTGGTGGTTCGCCATATCAAATTCTCTGAAAATTACAGATTGTACTCCCGCAGCCATTTTGTTAGAGGATTGGAAGCTGTGCTTCTGTTGGTTGTATACATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTAACTCTTAACAGTTGGTTCATGGCAATATCTTGGCTTTTTGCTCCCTATCTGTTCAATCCATCTGGGTTTGAGTGGCAGAAGACTGTGGAGGATTTCAGGGAATGGACCAATTGGCTCTTTTACCGAGGTGGAGTTGGTGTTAAGGGTGAAGAAAGTTGGGAATCATGGTGGGACTCAGAACTGGCACATATAAAAACCATTGAAGGGCGGATAGCAGAGACAATTTTAAATCTAAGATTCTTTCTTTTTCAATATGGAATTGTTTATAAGCTCCATGCACAAGGATCAAACACATCAGTGTCGGTATATGGGTTCTCCTGGATTGTGTTAGCTTGGCTTATAGTTCTTTTCAAGGTGTTTACCTTCAGCCAGAAGATGTCGGTCAATTTTCAGTTTTTGTTGCGATTTATCCAAGGTCTTTTCTTCCTTTTGACACTGGCTGGCCTGGCAGTTGCATTTGCTATTATGGATTTGTCAATGTTTGATGTACTTGCTTGCATCTTGGCATTTGTACCTACAGGATGGGGCATTCTTTCT 2082 39.87 MYRLSCRRFFAVRGMMYYRKALMLQTYLERGTYGDFKAAIPCTDATDTRGFDLSPEARALADLKFTYVVTCQIYGRQREQQKPEAADIALLMQRNEALRVAYIDDIETLKDGKVHKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFDHDHGIRPPTILGVREHVFTGSVSSLASFMSNQEATFVTLGQRILANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDVFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQITLFERKVAGGNGEQVLSRDVYRLGQLFDFFRTMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALFGVGETIEDRANIANIITLSTTLNTQFLIQIGICTVVPILGFISEQGFFKTIVSFITMQLQLCSIFFTFSLCTKTHYFGRTILHGGAKYQATGRGLVVRHIKFSENYRLYSRSHFVRGLEAVLLLVVYMAYGYSSGGSLAYILVTLNSWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGVGVKGEESWESWWDSELAHIKTIEGRIAETILNLRFFLFQYGIVYKLHAQGSNTSVSVYGFSWIVLAWLIVLFKVFTFSQKMSVNFQFLLRFIQGLFFLLTLAGLAVAFAIMDLSMFDVLACILAFVPTGWGILS 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28887997 28899316 + CaPI482276_03g014200.1 Cam03g1420 123686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1420 694 Pfam 1,3-beta-glucan synthase component 11 587 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cam03g1420 694 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 12 693 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1420 Cam-Chr3:28887997 Cam06g1915 Cam-Chr6:30084644 3.90E-294 dispersed
Cam03g1414 Cam-Chr3:28770165 Cam03g1420 Cam-Chr3:28887997 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1420 K11000 - csv:101216435 1262.67