Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1513 ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCGACCTTCCCAATCAGAGAAACATTTCACAGAGGACATTTTCCGGGAAAATTCCCAAATTATAAGCTCCGGCGAGATTACTCCGATTTGAAAGCTGCAAAGTCCGGCGTGTCCACCGTCTGTGAACCGCTCCCTCCCGACAGACCGCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTCCCTGGCGATTTTGGCTTTGATCCGCTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCAAGATGGGCAATGCTAGCCGTGGCCGGAATCCTACTGCCGGAATGGTTCGAAAGCTTAGGATTGATACAAAATTTCTCATGGTACGATGCCGGAGCGCGCGAGTATTTTGCAGACCCGACGACATTGCTGGTGGTGCAATTGGCATTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCAGACTTGGTCAATCCGGGCAGCGTGGATGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAAAGCCAGACGTGGGCTACCCGGGCGGGTTTTGGTTTGACCCCATGATGTGGGGCAGGGGCTCGCCGGAGCCGGTCATGGTGCTACGGACTAAAGAGATCAAGAATGGTCGGTTGGCCATGCTGGCGTTTGTCGGATTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCGCTTGAGAATCTGGCCGCCCACGTGGCAGATCCTGGCCATTGCAACATCTTTTCGGCATTTAGTTCGGGTTCGGGTTGA 798 55.64 MALSISSTALSTFPIRETFHRGHFPGKFPNYKLRRDYSDLKAAKSGVSTVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGAREYFADPTTLLVVQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30119407 30122490 + CaPI482276_03g015130.1 Cam03g1513 123779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1513 265 FunFam Chlorophyll a-b binding protein, chloroplastic 68 253 - -
Cam03g1513 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 257 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cam03g1513 265 SUPERFAMILY Chlorophyll a-b binding protein 57 260 - -
Cam03g1513 265 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Cam03g1513 265 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1513 Cam-Chr3:30119407 Cam11g1395 Cam-Chr11:26609014 5.00E-88 dispersed
Cam03g1513 Cam-Chr3:30119407 Cam04g1248 Cam-Chr4:26466273 1.20E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1513 K08908 - csv:101211430 533.872