Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1572 ATGGAGGAGGTTCTGATTCTTCAGCTGGTGATTCTTTGTCTCTTCATTGCTGTTAATGCTTCCAACCTTGGGGAAATTGCTGGATTCAGCTACTCTCCACCCCCTTCAAGTTTTCAAGCATTTCCTCCGGTTTTAGGAACACCTGGTCCAGTCCAACATGAAAAATCGTTGATAATCAATGGACCAAGCTCAGCGCCTCAGCAAAATGAGTCAACTTTGCAACCACCAGTTATGTTACCAGCAATTGCTCCAGGTCTGCTGCCTGATACGATCAAAGGGTTTATACCATCCGCTTCACCCCATGCTCCGACCGAGTCGCCACCATTTAATAGTATGCCTCAGCCACCTTTACCAGTTCAACCAAATGCACCATTGATTTCACCAAGTGCACCAGAACCAGAAGGTAAAGCACCAGCGACTGAGACTCCTCTGGCAATGGTTTCTCCAGATCCAGCTGTGTCATCTTCAAATTCTTCACATTATCCTCCAGCAAGTTCCCCGCATGAGCAAACAAATATTTCATCGAGTTCTCATCAAATCACTTCACCAAATGTAGCTCCAATCCCCGAGCCAATTTCCCCAGCGAGCAAGTTGCCCAAGAACTCACCAGCTAGTCATCCGGTAGTTCCTGAAAGACCTCCATCCATATTACCAGAGCCCAATATCTCTCCAATGGTGGCTATTTCCCCAAAAGCTGGTGACAGAAATAGATTAGAAGCACCAGCAGCTACACCTTATAATGCACTGCCCAAGTATATGCCACCTGTGTCTCATTCCCCAGAAGAAGCTCCTTCCAGTCACAATGACATGGGACATTCTCATGACGCCCAACAGCCGATCCTTCCACCACAAAAAGCTCCGTTTCATAGAGTAAATCTTTCTCCAACATCTCCTCCTTTGCCCTCAAATTATAAGCATCACAGAAGGAAGAATTATATCATCAGTCACGCACCTGCACCTGCACCATCATATCCAATTTCCTCCCCCACGACAAAAACGCCAGGTCCAGTTATTTCTACAGCACAACATTCGCCAGGCAGACGACATCATGCTCCACCTCCGGAATCAGAACCTTCGCCAATTTCTCCTTCACAATATGCTATGCCACCACCGCTTGTGACGCATGGTTCGCCTTCTCCTTCACCATACCAAAAAGTAGCTGGGCATGCTAGAAGACATTTTTATCCTCCGAAAGCTTCACCGCTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCAATTCATACGTTGCCTCCTCCACCTCCCAATGAAGATTGTTTAGCTACCCAGTGCACCGAGCCGTATACAAATACTCCCCCAGGATCTCCCTGCGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGTGTTTCGCTATATACCTTCTTCCCTCTGGTTTCAGAGCTGGCAGCGGAAATTGCTGTTGGGGTGTTTGTAAAGCAAAGCCAAGTTCGCATCATTGGAGCCAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTCCTTATTGATTTAGTTCCACTTGGCGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAGGTTTCAATCAAAACTTCCTATTTTGGGAACTATGAAGTATTATATGTTCGATATCCAGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGACTAGATAATGAGCCTTATTTCAGTAATAGTAATGATGCGAGGACAGTAAAACCAATCGGTGTTGATGTGCAGAACAGACAGCACAAAGATAGGCTAAGTGGTGGTATGATTGCCATCGTTGCCCTATCAACTACTGTTGCAGTGGTCTTATGTGTTGCAACTGCTTGGATTTTGCTCTTCAAACGCAATGATGGCCTTTGTCAGCCAAAACCGACTCCACATGTTTCGTTATCCTCCCTCAATAAACCATCAGGTGCTGGTGGATCAGTCATGGCAACCATGCCTAGTTCAGCATCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGGTCAGCCAAGACATTCAGCGCCTCTGACATTGAGAGAGCCACCAATGATTTTGATCCTTCAAGAATATTGGGAGAGGGTGGCTTTGGACGTGTTTACAGAGGCGTTCTTGAAGATGGTACCGAAGTAGCAGTCAAAGTTCTCAAGAGAGATGATCATCAGGGTGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGTCGTCTCCACCATAGAAATTTGGTCAAGTTGATTGGAATATGTACCGAGGAACGTAGCCGCGCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTGCATGGTGTTGATAAGGAAACTGCCCCACTTGATTGGGCTGCCCGGATCAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCAAGTCCTAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTGTTAGAAAATGATTTTACACCAAAGGTTTCTGACTTTGGGTTGGCTAGAACTGCAATGGATGAGGAAAGCAGACACATATCGACACGTGTCATGGGAACTTTCGGGTACGTGGCGCCAGAGTATGCAATGACCGGTCATCTACTTGTGAAGAGTGACGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTGTTAACTGGCAGGAAACCAGTAGATATGTCGCAACCGCCCGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCTCTCCTCACAAGCAAAGAAGGCCTAGATGTTATAATTGACAAATCACTAGATTCTAATATTCCTTTCGAAAATATTGCTAAAGTGGCAGCCATTGCTTCAATGTGTGTGCAACCGGAGGTGTCACATCGACCTTTCATGGGCGAGGTTGTTCAAGCATTGAAACTAGTTTGCAACCAATGCAACAAGGCTCGAGAAACAAGCTCACTGGCTGGTTCAAGCCCAGAGAGTTCAACTATCAATACAAATGATGATGAGACATCAAGCTCAAGATACATGCTAGACTCTTTTCATAGCGAATATTTAATACCTAACTCAATTTCGAGTCTAGATGGCATCGATACACATCTCTCAATTTCAGACCTGTTAAATACTTCGATCGGTATCGGAATGCAGGAATCTAGATCGCTGGAAAGATGCTTCAGTTCAGATCCTCCTAGAATCGGAAAAAGCAGAAGGCAGTTCTGGCAAAGAATGAGAAGATACTCCGGAAGTAGCATAAGTGAACATGGAATGCCTACTAGAATATGGTCAGCTCGGCAGTGCTACATGCAACAACTTGTTGGAATTGTGGAGCAAAAGTTCAATCACTTGATTGATGAATTGGGCCATACAAGAACAGTTGTCCTCTAA 3354 45.29 MEEVLILQLVILCLFIAVNASNLGEIAGFSYSPPPSSFQAFPPVLGTPGPVQHEKSLIINGPSSAPQQNESTLQPPVMLPAIAPGLLPDTIKGFIPSASPHAPTESPPFNSMPQPPLPVQPNAPLISPSAPEPEGKAPATETPLAMVSPDPAVSSSNSSHYPPASSPHEQTNISSSSHQITSPNVAPIPEPISPASKLPKNSPASHPVVPERPPSILPEPNISPMVAISPKAGDRNRLEAPAATPYNALPKYMPPVSHSPEEAPSSHNDMGHSHDAQQPILPPQKAPFHRVNLSPTSPPLPSNYKHHRRKNYIISHAPAPAPSYPISSPTTKTPGPVISTAQHSPGRRHHAPPPESEPSPISPSQYAMPPPLVTHGSPSPSPYQKVAGHARRHFYPPKASPLKPWAKSPKMPPIHTLPPPPPNEDCLATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAVGVFVKQSQVRIIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKTSYFGNYEVLYVRYPGLPQSPPSGDSGLDNEPYFSNSNDARTVKPIGVDVQNRQHKDRLSGGMIAIVALSTTVAVVLCVATAWILLFKRNDGLCQPKPTPHVSLSSLNKPSGAGGSVMATMPSSASLSFGSSIAPYSGSAKTFSASDIERATNDFDPSRILGEGGFGRVYRGVLEDGTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEERSRALVYELIPNGSVESHLHGVDKETAPLDWAARIKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSNIPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNKARETSSLAGSSPESSTINTNDDETSSSRYMLDSFHSEYLIPNSISSLDGIDTHLSISDLLNTSIGIGMQESRSLERCFSSDPPRIGKSRRQFWQRMRRYSGSSISEHGMPTRIWSARQCYMQQLVGIVEQKFNHLIDELGHTRTVVL 1117
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30707699 30713477 + CaPI482276_03g015720.1 Cam03g1572 123838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1572 1117 Gene3D Phosphorylase Kinase; domain 1 664 763 - -
Cam03g1572 1117 PANTHER OS01G0750732 PROTEIN 423 1004 IPR050885 -
Cam03g1572 1117 MobiDBLite consensus disorder prediction 355 377 - -
Cam03g1572 1117 MobiDBLite consensus disorder prediction 101 128 - -
Cam03g1572 1117 ProSitePatterns Protein kinases ATP-binding region signature. 694 716 IPR017441 GO:0005524(InterPro)
Cam03g1572 1117 MobiDBLite consensus disorder prediction 206 220 - -
Cam03g1572 1117 ProSiteProfiles Protein kinase domain profile. 688 964 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g1572 1117 Gene3D Transferase(Phosphotransferase) domain 1 764 982 - -
Cam03g1572 1117 MobiDBLite consensus disorder prediction 317 387 - -
Cam03g1572 1117 MobiDBLite consensus disorder prediction 93 221 - -
Cam03g1572 1117 MobiDBLite consensus disorder prediction 249 305 - -
Cam03g1572 1117 MobiDBLite consensus disorder prediction 974 994 - -
Cam03g1572 1117 FunFam Receptor-like serine/threonine-protein kinase ALE2 764 978 - -
Cam03g1572 1117 MobiDBLite consensus disorder prediction 149 186 - -
Cam03g1572 1117 CDD STKc_IRAK 694 962 - -
Cam03g1572 1117 Pfam Protein tyrosine and serine/threonine kinase 692 961 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g1572 1117 FunFam receptor-like serine/threonine-protein kinase ALE2 661 763 - -
Cam03g1572 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g1572 1117 SUPERFAMILY Protein kinase-like (PK-like) 668 961 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1572 Cam-Chr3:30707699 Cam06g0040 Cam-Chr6:2224802 9.40E-88 dispersed
Cam09g0318 Cam-Chr9:3551294 Cam03g1572 Cam-Chr3:30707699 1.10E-69 dispersed
Cam07g0148 Cam-Chr7:2621570 Cam03g1572 Cam-Chr3:30707699 1.90E-179 transposed
Cam10g1128 Cam-Chr10:24350236 Cam03g1572 Cam-Chr3:30707699 7.20E-105 transposed
Cam03g1572 Cam-Chr3:30707699 Cam09g0060 Cam-Chr9:1502068 1.30E-206 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85078 PF07714 PK_Tyr_Ser-Thr 2.80E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1572 - - - 0.0