Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam03g1572 | ATGGAGGAGGTTCTGATTCTTCAGCTGGTGATTCTTTGTCTCTTCATTGCTGTTAATGCTTCCAACCTTGGGGAAATTGCTGGATTCAGCTACTCTCCACCCCCTTCAAGTTTTCAAGCATTTCCTCCGGTTTTAGGAACACCTGGTCCAGTCCAACATGAAAAATCGTTGATAATCAATGGACCAAGCTCAGCGCCTCAGCAAAATGAGTCAACTTTGCAACCACCAGTTATGTTACCAGCAATTGCTCCAGGTCTGCTGCCTGATACGATCAAAGGGTTTATACCATCCGCTTCACCCCATGCTCCGACCGAGTCGCCACCATTTAATAGTATGCCTCAGCCACCTTTACCAGTTCAACCAAATGCACCATTGATTTCACCAAGTGCACCAGAACCAGAAGGTAAAGCACCAGCGACTGAGACTCCTCTGGCAATGGTTTCTCCAGATCCAGCTGTGTCATCTTCAAATTCTTCACATTATCCTCCAGCAAGTTCCCCGCATGAGCAAACAAATATTTCATCGAGTTCTCATCAAATCACTTCACCAAATGTAGCTCCAATCCCCGAGCCAATTTCCCCAGCGAGCAAGTTGCCCAAGAACTCACCAGCTAGTCATCCGGTAGTTCCTGAAAGACCTCCATCCATATTACCAGAGCCCAATATCTCTCCAATGGTGGCTATTTCCCCAAAAGCTGGTGACAGAAATAGATTAGAAGCACCAGCAGCTACACCTTATAATGCACTGCCCAAGTATATGCCACCTGTGTCTCATTCCCCAGAAGAAGCTCCTTCCAGTCACAATGACATGGGACATTCTCATGACGCCCAACAGCCGATCCTTCCACCACAAAAAGCTCCGTTTCATAGAGTAAATCTTTCTCCAACATCTCCTCCTTTGCCCTCAAATTATAAGCATCACAGAAGGAAGAATTATATCATCAGTCACGCACCTGCACCTGCACCATCATATCCAATTTCCTCCCCCACGACAAAAACGCCAGGTCCAGTTATTTCTACAGCACAACATTCGCCAGGCAGACGACATCATGCTCCACCTCCGGAATCAGAACCTTCGCCAATTTCTCCTTCACAATATGCTATGCCACCACCGCTTGTGACGCATGGTTCGCCTTCTCCTTCACCATACCAAAAAGTAGCTGGGCATGCTAGAAGACATTTTTATCCTCCGAAAGCTTCACCGCTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCAATTCATACGTTGCCTCCTCCACCTCCCAATGAAGATTGTTTAGCTACCCAGTGCACCGAGCCGTATACAAATACTCCCCCAGGATCTCCCTGCGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGTGTTTCGCTATATACCTTCTTCCCTCTGGTTTCAGAGCTGGCAGCGGAAATTGCTGTTGGGGTGTTTGTAAAGCAAAGCCAAGTTCGCATCATTGGAGCCAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTCCTTATTGATTTAGTTCCACTTGGCGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAGGTTTCAATCAAAACTTCCTATTTTGGGAACTATGAAGTATTATATGTTCGATATCCAGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGACTAGATAATGAGCCTTATTTCAGTAATAGTAATGATGCGAGGACAGTAAAACCAATCGGTGTTGATGTGCAGAACAGACAGCACAAAGATAGGCTAAGTGGTGGTATGATTGCCATCGTTGCCCTATCAACTACTGTTGCAGTGGTCTTATGTGTTGCAACTGCTTGGATTTTGCTCTTCAAACGCAATGATGGCCTTTGTCAGCCAAAACCGACTCCACATGTTTCGTTATCCTCCCTCAATAAACCATCAGGTGCTGGTGGATCAGTCATGGCAACCATGCCTAGTTCAGCATCTTTATCCTTTGGATCTAGCATTGCCCCATATTCAGGGTCAGCCAAGACATTCAGCGCCTCTGACATTGAGAGAGCCACCAATGATTTTGATCCTTCAAGAATATTGGGAGAGGGTGGCTTTGGACGTGTTTACAGAGGCGTTCTTGAAGATGGTACCGAAGTAGCAGTCAAAGTTCTCAAGAGAGATGATCATCAGGGTGGTCGAGAATTCTTGGCTGAAGTTGAAATGCTTAGTCGTCTCCACCATAGAAATTTGGTCAAGTTGATTGGAATATGTACCGAGGAACGTAGCCGCGCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTGCATGGTGTTGATAAGGAAACTGCCCCACTTGATTGGGCTGCCCGGATCAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCAAGTCCTAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTGTTAGAAAATGATTTTACACCAAAGGTTTCTGACTTTGGGTTGGCTAGAACTGCAATGGATGAGGAAAGCAGACACATATCGACACGTGTCATGGGAACTTTCGGGTACGTGGCGCCAGAGTATGCAATGACCGGTCATCTACTTGTGAAGAGTGACGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTGTTAACTGGCAGGAAACCAGTAGATATGTCGCAACCGCCCGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCTCTCCTCACAAGCAAAGAAGGCCTAGATGTTATAATTGACAAATCACTAGATTCTAATATTCCTTTCGAAAATATTGCTAAAGTGGCAGCCATTGCTTCAATGTGTGTGCAACCGGAGGTGTCACATCGACCTTTCATGGGCGAGGTTGTTCAAGCATTGAAACTAGTTTGCAACCAATGCAACAAGGCTCGAGAAACAAGCTCACTGGCTGGTTCAAGCCCAGAGAGTTCAACTATCAATACAAATGATGATGAGACATCAAGCTCAAGATACATGCTAGACTCTTTTCATAGCGAATATTTAATACCTAACTCAATTTCGAGTCTAGATGGCATCGATACACATCTCTCAATTTCAGACCTGTTAAATACTTCGATCGGTATCGGAATGCAGGAATCTAGATCGCTGGAAAGATGCTTCAGTTCAGATCCTCCTAGAATCGGAAAAAGCAGAAGGCAGTTCTGGCAAAGAATGAGAAGATACTCCGGAAGTAGCATAAGTGAACATGGAATGCCTACTAGAATATGGTCAGCTCGGCAGTGCTACATGCAACAACTTGTTGGAATTGTGGAGCAAAAGTTCAATCACTTGATTGATGAATTGGGCCATACAAGAACAGTTGTCCTCTAA | 3354 | 45.29 | MEEVLILQLVILCLFIAVNASNLGEIAGFSYSPPPSSFQAFPPVLGTPGPVQHEKSLIINGPSSAPQQNESTLQPPVMLPAIAPGLLPDTIKGFIPSASPHAPTESPPFNSMPQPPLPVQPNAPLISPSAPEPEGKAPATETPLAMVSPDPAVSSSNSSHYPPASSPHEQTNISSSSHQITSPNVAPIPEPISPASKLPKNSPASHPVVPERPPSILPEPNISPMVAISPKAGDRNRLEAPAATPYNALPKYMPPVSHSPEEAPSSHNDMGHSHDAQQPILPPQKAPFHRVNLSPTSPPLPSNYKHHRRKNYIISHAPAPAPSYPISSPTTKTPGPVISTAQHSPGRRHHAPPPESEPSPISPSQYAMPPPLVTHGSPSPSPYQKVAGHARRHFYPPKASPLKPWAKSPKMPPIHTLPPPPPNEDCLATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAVGVFVKQSQVRIIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKTSYFGNYEVLYVRYPGLPQSPPSGDSGLDNEPYFSNSNDARTVKPIGVDVQNRQHKDRLSGGMIAIVALSTTVAVVLCVATAWILLFKRNDGLCQPKPTPHVSLSSLNKPSGAGGSVMATMPSSASLSFGSSIAPYSGSAKTFSASDIERATNDFDPSRILGEGGFGRVYRGVLEDGTEVAVKVLKRDDHQGGREFLAEVEMLSRLHHRNLVKLIGICTEERSRALVYELIPNGSVESHLHGVDKETAPLDWAARIKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSNIPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNKARETSSLAGSSPESSTINTNDDETSSSRYMLDSFHSEYLIPNSISSLDGIDTHLSISDLLNTSIGIGMQESRSLERCFSSDPPRIGKSRRQFWQRMRRYSGSSISEHGMPTRIWSARQCYMQQLVGIVEQKFNHLIDELGHTRTVVL | 1117 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 30707699 | 30713477 | + | CaPI482276_03g015720.1 | Cam03g1572 | 123838 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam03g1572 | 1117 | Gene3D | Phosphorylase Kinase; domain 1 | 664 | 763 | - | - | |
Cam03g1572 | 1117 | PANTHER | OS01G0750732 PROTEIN | 423 | 1004 | IPR050885 | - | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 355 | 377 | - | - | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 101 | 128 | - | - | |
Cam03g1572 | 1117 | ProSitePatterns | Protein kinases ATP-binding region signature. | 694 | 716 | IPR017441 | GO:0005524(InterPro) | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 206 | 220 | - | - | |
Cam03g1572 | 1117 | ProSiteProfiles | Protein kinase domain profile. | 688 | 964 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam03g1572 | 1117 | Gene3D | Transferase(Phosphotransferase) domain 1 | 764 | 982 | - | - | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 317 | 387 | - | - | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 93 | 221 | - | - | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 249 | 305 | - | - | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 974 | 994 | - | - | |
Cam03g1572 | 1117 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 764 | 978 | - | - | |
Cam03g1572 | 1117 | MobiDBLite | consensus disorder prediction | 149 | 186 | - | - | |
Cam03g1572 | 1117 | CDD | STKc_IRAK | 694 | 962 | - | - | |
Cam03g1572 | 1117 | Pfam | Protein tyrosine and serine/threonine kinase | 692 | 961 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam03g1572 | 1117 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 661 | 763 | - | - | |
Cam03g1572 | 1117 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 810 | 822 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam03g1572 | 1117 | SUPERFAMILY | Protein kinase-like (PK-like) | 668 | 961 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g1572 | Cam-Chr3:30707699 | Cam06g0040 | Cam-Chr6:2224802 | 9.40E-88 | dispersed | |
Cam09g0318 | Cam-Chr9:3551294 | Cam03g1572 | Cam-Chr3:30707699 | 1.10E-69 | dispersed | |
Cam07g0148 | Cam-Chr7:2621570 | Cam03g1572 | Cam-Chr3:30707699 | 1.90E-179 | transposed | |
Cam10g1128 | Cam-Chr10:24350236 | Cam03g1572 | Cam-Chr3:30707699 | 7.20E-105 | transposed | |
Cam03g1572 | Cam-Chr3:30707699 | Cam09g0060 | Cam-Chr9:1502068 | 1.30E-206 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85078 | PF07714 | PK_Tyr_Ser-Thr | 2.80E-49 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam03g1572 | - | - | - | 0.0 |