Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1645 ATGGATTTTAGGGATTCAATTTTGATGGTGATTGTGGTGTGTTTAGTGGGCTGGCTATGGAGACTTTTTAATTGGATTTGGTTGAGGCCAAAGAAACTTGAGAAGTGCCTGAGAGACCAAGGACTCGCCGGAAATTCTTACCGTCTTTACTCCGGCGACTTGAACGACATCGCCGCCATGATGAAACAAGCCAAATCCAAACCCATGAGCTTCTCACATGATATTGCTCCACGTGTCATCCCATCCATACATCATACCATTCACAAATATGGGAAGAATTCATTCATGTGGCTTGGACCATATCCAAGAGTGCACATTACGGATCCTGAGCAATTGAAAGCTGCCTTTTCACAATATAGTGACTTTCAAAAGCCAACTATCAACCCTCTTGTTGGGTTGCTTTTTGATGGACTTATTAATCATGAAGGAGCACAATGGGCTAAACATAGAAAAATAATCAACCCTGCTTTTCATTTCGAGAAGTTGAAGGACATGGTGCCAACAATGTTTGAGAGTTGCAATTTGATGATTAACAAATGGGAAAGAATGATCTCAAAAGATGGATTTTGTGAATTGGATGTGATGCCTCATTTGCAAAACTTGGCAGCTGATGTCATTTCTCGAACAGCATTTGGAAGCACTTACGAAGAAGGAAAAATTATATTTAATTACCTAAAAGAATTGCTTAATTTGGTCATTGAAGCTAGTAATACCGTTTACATACCGGGATGGAGGTTTCTACCAACAAAGTCAAACAATAGAATGAAAAAGATAAGTAAAGAAATAAAAACTTTGCTCTTGAATGTTGTCAATAAAAGGCAAAGGGCAATGAAGGAAGGTGAAGACGCTATACATAGTGATTTACTAGGCATTCTCTTAGAATCAAATTTCAATGAAATTCAAGAACATGGAAATGTCAATATTGGAATGAGCATAAACGACTTGGTTCAAGAATGTAAGGTTTTTTATTTTGCTGGCCAAGAAACCACAGCGTTGCTACTAGTTTGGACCATGGTTTTGTTAAGCTCATATCCAAAATGGCAAGATCGAGCAAGAGCTGAGGTCTTAGAAGTCTTTGGCAACAACAAACCAGATTTTGATGGTTTAAATCGACTAAAAATTGTTACTATGATTTTGAACGAGGTTCTGAGATTATACCCACCAGCAGGGGTGTTCAGTCGTCGTCTTGTTAAAAAAGAAACAAGACTTGGAAATTTGACTTTTCCACGTGGAGTGTTGTTGAGTTTCCCAATTCTTCTTATTCATCATGATCCAGAGTTATGGGGTGAAGACGCAAACGAATTTAATCCAGAAAGATTTGCTGAGGGAGTGTCAAAAGCAACCAAAAATCAAACCGGATTCTTCCCCTTTGGTTGGGGTCCTCGAATATGCATTGGACAAAATTTTGCCATGATCGAGGCCAAACTTGCATTGTCCATGATTCTACGACATTTCTCATTTGAACTTTCTTCATCCTATACTCATGCTCCTTCATCCATTTTAACTATTCAACCTCAGCATGGAGCTCATATCATCCTACATAAACTTTAA 1551 38.49 MDFRDSILMVIVVCLVGWLWRLFNWIWLRPKKLEKCLRDQGLAGNSYRLYSGDLNDIAAMMKQAKSKPMSFSHDIAPRVIPSIHHTIHKYGKNSFMWLGPYPRVHITDPEQLKAAFSQYSDFQKPTINPLVGLLFDGLINHEGAQWAKHRKIINPAFHFEKLKDMVPTMFESCNLMINKWERMISKDGFCELDVMPHLQNLAADVISRTAFGSTYEEGKIIFNYLKELLNLVIEASNTVYIPGWRFLPTKSNNRMKKISKEIKTLLLNVVNKRQRAMKEGEDAIHSDLLGILLESNFNEIQEHGNVNIGMSINDLVQECKVFYFAGQETTALLLVWTMVLLSSYPKWQDRARAEVLEVFGNNKPDFDGLNRLKIVTMILNEVLRLYPPAGVFSRRLVKKETRLGNLTFPRGVLLSFPILLIHHDPELWGEDANEFNPERFAEGVSKATKNQTGFFPFGWGPRICIGQNFAMIEAKLALSMILRHFSFELSSSYTHAPSSILTIQPQHGAHIILHKL 516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 31538574 31545580 - CaPI482276_03g016450.1 Cam03g1645 123911
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1645 516 Pfam Cytochrome P450 87 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 FunFam Cytochrome P450 734A1 27 516 - -
Cam03g1645 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam03g1645 516 Gene3D Cytochrome P450 72 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 CDD CYP72 80 512 - -
Cam03g1645 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 508 IPR050665 GO:0004497(PANTHER)
Cam03g1645 516 SUPERFAMILY Cytochrome P450 76 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam03g1645 516 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1539 Cam-Chr3:30335688 Cam03g1645 Cam-Chr3:31538574 4.20E-144 dispersed
Cam03g1645 Cam-Chr3:31538574 Cam11g1736 Cam-Chr11:29965092 5.50E-216 dispersed
Cam03g1645 Cam-Chr3:31538574 Cam11g0267 Cam-Chr11:4179852 5.40E-115 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1645 - - - 0.0