Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1677 ATGATGGCCGGGACTAATCAAATCAATCTCAACGAGGCTAGGATGGTGGTTCCACTAAATACCTGGGTTCTCATTTCCAACTTTAAGTTGGCTTACAATCTTCTTCGTCGACCTGATGGGACCTTCAATCGGCATTTGGCAGAGTTTCTCGACAGAAAAGTCCCGGCGAATGCTAACCCGGTTGACGGGACTTTCTCGTTCGATGTCATTATCGATCGTGCTACGAGTCTGCTTTGTAGAATTTATCGACCAGCCAACGGAGGGGAACCTCAGACTACTAACATTGTTGATCTTGAGAAGCCTGTGGATTCTGAGGTTGTTGTTCCTGTTATTGTTTTCTTTCATGGTGGAAGCTTTGCGCATTCGTCTGCTAACAGTGCTATCTATGATACACTATGCCGTCGATTGGTGAGCCTTTGCAAGGCTGTTGTTGTCTCTGTGAACTACCGTCGTGCACCTGAAAATCGGTATCCATGTGCTTATGATGATGGATGGACTGCACTTAATTGGGTAAATTCAAGATCATGGCTCCAAAGTAAAGACTCCAAAACGTATATTTATTTGGCTGGCGATAGTTCGGGTGGAAACATCGTACACCATGTTGCATCAAGAGCAGTAAGGTCGGGAATCGAAGTATTGGGTAATATACTTCTCAATCCAATGTTTGGAGGACAGGAAAGAACTAAATCTGAGATTCGATTGGATGGAAAGTATTTCGTCACCATCCGGGATAGAGATTGGTATTGGAGGGCCTTCCTCCCTGAAGGAGAAGATAGAGATCATCCAGCATGTAATCCCTTTGGCCCGAGGGGCAATAGCCTCGAAGGAATCAAATTCCCAAAAAGCCTTGTCGTGGTGGCTGGTTTAGATCTTGTCCAAGATTGGCAATTGGCTTATGCCAAAGGGCTGGAGAAGGATGGCCAAGAGGTGAAACTTTTGTATCTTGAGCAGGCAACAATTGGCTTCTACTTGCTACCAAATACCGAGCACTTCTATACCGTCATGGACGAGATAAGTGAATTCGTGAGTTCTGACTGTTAA 1041 45.15 MMAGTNQINLNEARMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGTFSFDVIIDRATSLLCRIYRPANGGEPQTTNIVDLEKPVDSEVVVPVIVFFHGGSFAHSSANSAIYDTLCRRLVSLCKAVVVSVNYRRAPENRYPCAYDDGWTALNWVNSRSWLQSKDSKTYIYLAGDSSGGNIVHHVASRAVRSGIEVLGNILLNPMFGGQERTKSEIRLDGKYFVTIRDRDWYWRAFLPEGEDRDHPACNPFGPRGNSLEGIKFPKSLVVVAGLDLVQDWQLAYAKGLEKDGQEVKLLYLEQATIGFYLLPNTEHFYTVMDEISEFVSSDC 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31869333 31870904 + CaPI482276_03g016770.1 Cam03g1677 123943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1677 346 PANTHER ARYLACETAMIDE DEACETYLASE 37 336 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Cam03g1677 346 Pfam alpha/beta hydrolase fold 111 323 IPR013094 GO:0016787(InterPro)
Cam03g1677 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 127 IPR002168 GO:0016787(InterPro)
Cam03g1677 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 186 198 IPR033140 -
Cam03g1677 346 FunFam Gibberellin receptor GID1 2 344 - -
Cam03g1677 346 Gene3D alpha/beta hydrolase 1 344 IPR029058 -
Cam03g1677 346 SUPERFAMILY alpha/beta-Hydrolases 57 342 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1677 Cam-Chr3:31869333 Cam09g0650 Cam-Chr9:6423243 2.00E-150 dispersed
Cam03g1677 Cam-Chr3:31869333 Cam02g2473 Cam-Chr2:37193817 1.90E-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1677 K14493 - csv:101213253 654.055