Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1696 ATGGATGTTACCAACAATTCAAGAGCACCACCACCACCACCACCACCAAAAAATCACTTCCATAACCACAACAATTCCAAATTCCACCAACATTACCACAACCACAATGCCATTCTCAGCTCAAATTCCTTCCTCATTATCATTGCCTCAATCATCTCCATCACCATTCTCCTTGCCATCTTCTTCCTCATCTTCATGCTTCTCCGCCTCAAATCCGCTCGAAACACCGCCACTGCCGCCGCCTCTACCGCTGCACAATCCACCACATTCATCCCTCACACGACCATCAATTTTGACTCAAGCCCAGAAGTGAAGGGGGGTGGGTGCTTATATGGAGGCAATTCTGGGAGAATTCCTCAGTATAGAATCAGGGGAGTTCAAGTTTTCACTTATAAGGAACTGGAATTGGCTACTGACAATTTTAATGAAGCAAATGTGATTGGAAATGGAAGATTAGGGTTTGTGTACAGAGGAGTTCTTGCAGATGGAGCTGTGGTTGCCATTAAAATGCTTCACAGAGATGGCAAGCAGAGGGAACGTGCTTTCAGAATGGAGGTAGATCTCCTAAGCCGCTTGCACTCTCCTTGTTTGGTGGAATTGCTTGGCTACTGTGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGTACTCTTCATCATCATCTACATAATCCCAACAGTGAATCTCGGCCATTGGATTGGAAAACTAGAATGAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTCCTCCATGAGCATGCAGTTCCATCTGTTATTCATAGAAACTTCAAGTGCACCAATGTTCTACTGGATCAGGATTTCCGAGCCAAGGTGTCGGATTTTGGTTCGGCCAAGATGGGCTCTGACAAGATCAATGGTCAGATATCTACACAAGTCCTGGGAACCACAGGATATCTAGCACCAGAGTATGCTTCAACAGGAAAACTTACAACAAAGTCAGATGTGTACAGCTATGGTGTTGTGCTGCTTGAGCTATTGACCGGTCGAGTGCCGGTCGATATCAAACGGCCGCAGGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAGGCTGACTAATAGAGAAAAAGTAGAGAAAATGATTGACCCAGCTATTCAAGGGAAGTACTCAAAAAAGGATCTAATTCAGGTAGCAGCCATTGCAGCCATGTGTGTGCAGCCTGAAGCCGACTACCGGCCTTTGATGACCGACGTTGTGCAGTCACTGGTTCCTCTAGTTAAGAACCCACCATCGTCGTCTCGATTCTTCAATTGA 1290 46.05 MDVTNNSRAPPPPPPPKNHFHNHNNSKFHQHYHNHNAILSSNSFLIIIASIISITILLAIFFLIFMLLRLKSARNTATAAASTAAQSTTFIPHTTINFDSSPEVKGGGCLYGGNSGRIPQYRIRGVQVFTYKELELATDNFNEANVIGNGRLGFVYRGVLADGAVVAIKMLHRDGKQRERAFRMEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESRPLDWKTRMRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPPSSSRFFN 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32095071 32098097 - CaPI482276_03g016960.1 Cam03g1696 123962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1696 429 Gene3D Phosphorylase Kinase; domain 1 114 216 - -
Cam03g1696 429 Gene3D Transferase(Phosphotransferase) domain 1 217 424 - -
Cam03g1696 429 ProSiteProfiles Protein kinase domain profile. 141 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam03g1696 429 SUPERFAMILY Protein kinase-like (PK-like) 119 414 IPR011009 -
Cam03g1696 429 FunFam Somatic embryogenesis receptor kinase 1 114 216 - -
Cam03g1696 429 Pfam Protein tyrosine and serine/threonine kinase 145 414 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam03g1696 429 CDD STKc_IRAK 147 417 - -
Cam03g1696 429 PANTHER OS01G0750732 PROTEIN 10 419 IPR050885 -
Cam03g1696 429 MobiDBLite consensus disorder prediction 1 27 - -
Cam03g1696 429 FunFam Receptor-like serine/threonine-protein kinase ALE2 217 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1696 Cam-Chr3:32095071 Cam07g0268 Cam-Chr7:3768145 1.50E-113 dispersed
Cam03g1691 Cam-Chr3:32022032 Cam03g1696 Cam-Chr3:32095071 2.00E-42 proximal
Cam04g0830 Cam-Chr4:22557516 Cam03g1696 Cam-Chr3:32095071 7.40E-49 transposed
Cam03g1696 Cam-Chr3:32095071 Cam05g0685 Cam-Chr5:5961838 2.10E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85087 PF07714 PK_Tyr_Ser-Thr 6.30E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1696 - - - 0.0