Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1701 ATGGCATTCTCTATCTCCTTCCTCAAATCCTCCGCTCTCTTTCTCACCATTCTCTCTGTTTTCATCTTCTTCATCCTCTTCACTCCCAATCGCTCGCCGGAATCCGCATCCAGAAGGTCCCTCATTGCTGCCGGCGATTTCAATTCCAGTGTCCCTTCGATCCCATCTTGTTCCTCTGTTGAATCTCACTCCGATGGCCTCGTTAACTACTTGTATTTCCATTTCTGCTTCTTTGATCAAAACCCATCTCTCTCTGTCCCTTTTCTCATTCTCTTTCTTCTCCTCCACTTCTACATCCTCATCAAAACTGCTCAAGATCACTTCTCCATTGTCACTTCCAAGCTTGCCTTTCACCTCAACTTGTCCCCGAGTATGGCCGCCGTGACGCTCTTGGCTTTGGGCAATGGCGCTCCGGATGTGTTCGCATCTGTTGCCGCGGTTCGTGGTGGTCAGTATCGAACTGGGTTCGGTGCAATTCTCTCTGCGGGCACGTTTGTTTCCGCTTTTGTGGTTGGATTTGTGGCCATTTATGCTGCTCCGTTTTCGGTGAATCCGGCTCAGTTTGTAAGGGATGTGCTGTTCTATTTGACTGCAGCATTGTTCTTGTTCTATGTGTATCTTAGTGCAGAGATTTTCTTGTGGCAAGCTGTTGGTTTTGTTGGGTTCTATCTGTTCTTTGTTGGATTGGTGTTTTGGATGGATTTGAGAATGGATAGTGGGAAAGCTAAGAGTGGGGCTGATATGGGAGTGACTAGAGAAGCTGAAATCTACCATGGTGAGTTGCCTCAAGACTGTGAGATTGGAGAAAGCTACAGAACTGTGGATGAAGGAAAAACCAATTCTGGCTTTTGGGAAGCTCTTCGAATGATCCCAAAAGCATGGGAAGCTCCTGTCTCGTTTCTTCTGAAGCTCACCATTCCCCAACCTGCACCTTCCCAATGGAGCAGATTCTTTACATCCGCGAATATTTCTCTTTGTCCCATTGCTCTTCTATATGCCTGTAACTCATTCATGTCGTTTAACCATCCCATTGCTTTCCTCTTACCGAATACACATTTACCTCTTTGGTTCGTAGTATTCTTAGCAAGCTCCTCTCTTGCAGTTCTGCACTTTGTCATGGAAACTGAACCCCCAAAAACTGAGCAAGTCCCTACTGTGCTTGCAGCATTTGTGATGAGTGTATTTTGGATTTCGACCACAGCTGGGGAACTTCTGAACTGTCTTGCAGCTCTTGGGGTGCTTCTCAAACTCCCAGCAGCTCTACTTGGGCTTACTGTGCTTGCCTGGGGAAATTCAGTTGGGGATCTTGTGGCTGATGTTGCTCTTGCAAAAGCAGGCCAGCCCTTGCTTGCTATGGCTGGATGCTTTGCAGGGCCAATGTTTAACATGCTTGTGGGGCTTGGTACAGCTTTAGTTATACAAACAGCTAACAGTTATCCGGAGGCGTATCAGCTTCAATTTCATATCGGAATCGTGATTGCATTCGTATTCCTACTTTTCAGCCTGATGGGCTCCCTACTTGTAATTATTTGGTACAGATTTCGGGTGCCTCGGTTTTGGGGATTCTGTCTTGTGCTGCTGTACATTGTTTTCATGGCTGCCAGTTTACTGATGGCCAATCTAGACATAAAGCCATCTTATTTCCTCTCTGCTCAACAACCTGAAGGCACTTTTAAGTTGGCATGGTTGTTGGCTTGGAATCTGCTATGA 1710 46.43 MAFSISFLKSSALFLTILSVFIFFILFTPNRSPESASRRSLIAAGDFNSSVPSIPSCSSVESHSDGLVNYLYFHFCFFDQNPSLSVPFLILFLLLHFYILIKTAQDHFSIVTSKLAFHLNLSPSMAAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFSVNPAQFVRDVLFYLTAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGLVFWMDLRMDSGKAKSGADMGVTREAEIYHGELPQDCEIGESYRTVDEGKTNSGFWEALRMIPKAWEAPVSFLLKLTIPQPAPSQWSRFFTSANISLCPIALLYACNSFMSFNHPIAFLLPNTHLPLWFVVFLASSSLAVLHFVMETEPPKTEQVPTVLAAFVMSVFWISTTAGELLNCLAALGVLLKLPAALLGLTVLAWGNSVGDLVADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVIQTANSYPEAYQLQFHIGIVIAFVFLLFSLMGSLLVIIWYRFRVPRFWGFCLVLLYIVFMAASLLMANLDIKPSYFLSAQQPEGTFKLAWLLAWNLL 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32170665 32174350 + CaPI482276_03g017010.1 Cam03g1701 123967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1701 569 Gene3D - 121 251 IPR044880 -
Cam03g1701 569 Gene3D - 318 536 IPR044880 -
Cam03g1701 569 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 55 539 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
Cam03g1701 569 Pfam Sodium/calcium exchanger protein 91 232 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam03g1701 569 Pfam Sodium/calcium exchanger protein 387 536 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1701 Cam-Chr3:32170665 Cam10g1563 Cam-Chr10:29318423 4.80E-48 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1701 K13754 - csv:101209909 924.465