Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1798 ATGTTGAAGATGATAATGGTGGCTAAAGAAGAGCGAAGTCTCTCTCATTGCCATTTGCGCACGAGGTCCGTGGCATCCCAACGCAGCTTCTCAAGTTTTGGTGAAGTCCTATGTCCAAACTACACTAGGGTGCCTTTGGTTAACAGAAGTGGATTTGACCGGCAATTCAAAATGGATTACCGGGGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGGCTATGCTCAGGAGCAGGGATCTCTTGCTGATGACTTTATAGATGATTTTCGCTTGCCCATCAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCAAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAATCTGGAATGAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAAGAAAATATCCAGCGGAAAAAACTTGATGTTGAGGTGGAAGAGACAGAAGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCATAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGCTGGAGCAACAAGAAAGAGCAGCCGAGGCTCCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCAAAAGTAGCACCTGTAGCTTCAGTTTTCGGGAATGATAGCGATGACGAATAG 1071 42.02 MLKMIMVAKEERSLSHCHLRTRSVASQRSFSSFGEVLCPNYTRVPLVNRSGFDRQFKMDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQMLEQQERAAEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33079846 33083865 - CaPI482276_03g017980.1 Cam03g1798 124064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1798 356 MobiDBLite consensus disorder prediction 247 356 - -
Cam03g1798 356 Coils Coil 277 297 - -
Cam03g1798 356 MobiDBLite consensus disorder prediction 301 331 - -
Cam03g1798 356 ProSitePatterns Zinc finger C2H2 type domain signature. 216 238 IPR013087 -
Cam03g1798 356 ProSiteProfiles G-patch domain profile. 119 164 IPR000467 GO:0003676(InterPro)
Cam03g1798 356 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 58 356 - -
Cam03g1798 356 SMART G-patch_5 117 162 IPR000467 GO:0003676(InterPro)
Cam03g1798 356 SUPERFAMILY beta-beta-alpha zinc fingers 195 248 IPR036236 -
Cam03g1798 356 MobiDBLite consensus disorder prediction 247 277 - -
Cam03g1798 356 Pfam G-patch domain 120 160 IPR000467 GO:0003676(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0810 Cam-Chr2:10268457 Cam03g1798 Cam-Chr3:33079846 1.10E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1798 - - - 0.0